Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BS467_RS18685 Genome accession   NZ_CP018574
Coordinates   3577890..3578840 (-) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain GLB197     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3572890..3583840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS18655 (BS467_18675) - 3573219..3573581 (+) 363 WP_008348633.1 hypothetical protein -
  BS467_RS18660 (BS467_18680) - 3573667..3574101 (+) 435 WP_035700181.1 hypothetical protein -
  BS467_RS18665 (BS467_18685) - 3574136..3575092 (-) 957 WP_007499147.1 LCP family protein -
  BS467_RS18670 (BS467_18690) - 3575231..3576175 (-) 945 WP_008348640.1 siderophore ABC transporter substrate-binding protein -
  BS467_RS18675 (BS467_18695) - 3576198..3576956 (-) 759 WP_046343114.1 ABC transporter ATP-binding protein -
  BS467_RS18680 (BS467_18700) - 3576947..3577897 (-) 951 WP_060780946.1 iron chelate uptake ABC transporter family permease subunit -
  BS467_RS18685 (BS467_18705) ceuB 3577890..3578840 (-) 951 WP_017366964.1 ABC transporter permease Machinery gene
  BS467_RS18690 (BS467_18710) - 3578999..3579277 (-) 279 WP_074042116.1 barstar family protein -
  BS467_RS18695 (BS467_18715) - 3579340..3580509 (-) 1170 WP_074042117.1 MFS transporter -
  BS467_RS18700 (BS467_18720) - 3580653..3582092 (+) 1440 WP_164071368.1 PLP-dependent aminotransferase family protein -
  BS467_RS18705 (BS467_18725) - 3582123..3582605 (-) 483 WP_017360234.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=209016 BS467_RS18685 WP_017366964.1 3577890..3578840(-) (ceuB) [Bacillus altitudinis strain GLB197]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=209016 BS467_RS18685 WP_017366964.1 3577890..3578840(-) (ceuB) [Bacillus altitudinis strain GLB197]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTACTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GTCTTATGGTCGGCATTATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment