Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BS467_RS17120 Genome accession   NZ_CP018574
Coordinates   3279029..3279490 (+) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain GLB197     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3274029..3284490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS17095 (BS467_17105) - 3274909..3275766 (+) 858 WP_074042056.1 metallophosphoesterase -
  BS467_RS17100 (BS467_17110) - 3275923..3276420 (+) 498 WP_074042057.1 L,D-transpeptidase family protein -
  BS467_RS17105 (BS467_17115) - 3276494..3277771 (+) 1278 WP_046343422.1 MFS transporter -
  BS467_RS19830 - 3277996..3278172 (-) 177 WP_164071367.1 hypothetical protein -
  BS467_RS17115 (BS467_17125) - 3278337..3278552 (+) 216 WP_008348016.1 hypothetical protein -
  BS467_RS17120 (BS467_17130) kre 3279029..3279490 (+) 462 WP_007498684.1 YkyB family protein Regulator
  BS467_RS17125 (BS467_17140) - 3279730..3280638 (-) 909 WP_008348035.1 chemotaxis protein -
  BS467_RS17130 (BS467_17145) - 3280712..3282022 (-) 1311 WP_007498688.1 MFS transporter -
  BS467_RS17135 (BS467_17150) - 3282148..3282687 (-) 540 WP_074042058.1 RDD family protein -
  BS467_RS19835 - 3282988..3283140 (+) 153 WP_017367142.1 hypothetical protein -
  BS467_RS17140 (BS467_17155) - 3283205..3284089 (-) 885 WP_017359428.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=209005 BS467_RS17120 WP_007498684.1 3279029..3279490(+) (kre) [Bacillus altitudinis strain GLB197]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=209005 BS467_RS17120 WP_007498684.1 3279029..3279490(+) (kre) [Bacillus altitudinis strain GLB197]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment