Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BS467_RS17000 Genome accession   NZ_CP018574
Coordinates   3260256..3260837 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain GLB197     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3255256..3265837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS16970 (BS467_16975) - 3255288..3255779 (-) 492 WP_074042053.1 molybdenum cofactor biosynthesis protein MoaE -
  BS467_RS16975 (BS467_16980) mobB 3255772..3256299 (-) 528 WP_074042054.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BS467_RS16980 (BS467_16985) glp 3256281..3257555 (-) 1275 WP_074042055.1 gephyrin-like molybdotransferase Glp -
  BS467_RS16985 (BS467_16990) - 3257565..3258581 (-) 1017 WP_008345168.1 MoeB/ThiF family adenylyltransferase -
  BS467_RS16990 (BS467_16995) - 3258611..3259192 (-) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  BS467_RS16995 (BS467_17000) - 3259276..3260193 (+) 918 WP_008345172.1 hypothetical protein -
  BS467_RS17000 (BS467_17005) rok 3260256..3260837 (-) 582 WP_007498648.1 hypothetical protein Regulator
  BS467_RS17005 (BS467_17010) - 3261319..3261777 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  BS467_RS17010 (BS467_17020) ahpA 3262054..3262596 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  BS467_RS17015 (BS467_17025) - 3262868..3263677 (+) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  BS467_RS17020 (BS467_17030) - 3263702..3263944 (-) 243 WP_003211408.1 YkuS family protein -
  BS467_RS17025 (BS467_17035) - 3263995..3265173 (-) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=209004 BS467_RS17000 WP_007498648.1 3260256..3260837(-) (rok) [Bacillus altitudinis strain GLB197]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=209004 BS467_RS17000 WP_007498648.1 3260256..3260837(-) (rok) [Bacillus altitudinis strain GLB197]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment