Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BS467_RS12825 Genome accession   NZ_CP018574
Coordinates   2452869..2453672 (+) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain GLB197     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2447869..2458672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS12805 (BS467_12810) - 2447876..2448730 (+) 855 WP_007501164.1 TlyA family RNA methyltransferase -
  BS467_RS12810 (BS467_12815) ahrC 2448892..2449341 (+) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  BS467_RS12815 (BS467_12820) recN 2449376..2451109 (+) 1734 WP_035390783.1 DNA repair protein RecN Machinery gene
  BS467_RS12820 (BS467_12825) spoIVB 2451308..2452585 (+) 1278 WP_060832426.1 SpoIVB peptidase -
  BS467_RS12825 (BS467_12830) spo0A 2452869..2453672 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  BS467_RS12830 (BS467_12835) - 2454122..2455222 (+) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  BS467_RS12835 (BS467_12840) - 2455449..2456186 (+) 738 WP_017367573.1 glycerophosphodiester phosphodiesterase -
  BS467_RS12840 (BS467_12845) - 2456220..2456456 (-) 237 WP_017357960.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=208996 BS467_RS12825 WP_008342226.1 2452869..2453672(+) (spo0A) [Bacillus altitudinis strain GLB197]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=208996 BS467_RS12825 WP_008342226.1 2452869..2453672(+) (spo0A) [Bacillus altitudinis strain GLB197]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTACTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTTGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment