Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BS467_RS04195 | Genome accession | NZ_CP018574 |
| Coordinates | 835310..835600 (+) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain GLB197 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 830310..840600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS467_RS04175 (BS467_04190) | - | 830494..831696 (-) | 1203 | WP_060831990.1 | G5 and 3D domain-containing protein | - |
| BS467_RS04180 (BS467_04195) | - | 831941..832708 (-) | 768 | WP_017359325.1 | TatD family hydrolase | - |
| BS467_RS04185 (BS467_04200) | metG | 832790..834790 (-) | 2001 | WP_035704074.1 | methionine--tRNA ligase | - |
| BS467_RS04195 (BS467_04210) | abrB | 835310..835600 (+) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BS467_RS04200 (BS467_04215) | rsmI | 835645..836526 (-) | 882 | WP_008341890.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BS467_RS04205 (BS467_04220) | - | 836501..836800 (-) | 300 | WP_017359327.1 | GIY-YIG nuclease family protein | - |
| BS467_RS04210 (BS467_04225) | - | 836787..837530 (-) | 744 | WP_046527641.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BS467_RS04215 (BS467_04230) | yabA | 837586..837939 (-) | 354 | WP_007496228.1 | DNA replication initiation control protein YabA | - |
| BS467_RS04220 (BS467_04235) | - | 837954..838781 (-) | 828 | WP_007496230.1 | PSP1 domain-containing protein | - |
| BS467_RS04225 (BS467_04240) | holB | 838784..839773 (-) | 990 | WP_017359329.1 | DNA polymerase III subunit delta' | - |
| BS467_RS04230 (BS467_04245) | - | 839785..840225 (-) | 441 | WP_008341898.1 | YaaR family protein | - |
| BS467_RS04235 (BS467_04250) | - | 840238..840567 (-) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=208966 BS467_RS04195 WP_087975202.1 835310..835600(+) (abrB) [Bacillus altitudinis strain GLB197]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=208966 BS467_RS04195 WP_087975202.1 835310..835600(+) (abrB) [Bacillus altitudinis strain GLB197]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGACGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGACGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |