Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BS467_RS00190 Genome accession   NZ_CP018574
Coordinates   32789..33580 (-) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus altitudinis strain GLB197     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 27789..38580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS00165 (BS467_00165) - 30425..31408 (-) 984 WP_017366872.1 glycosyltransferase family 2 protein -
  BS467_RS00170 (BS467_00170) - 31710..31982 (-) 273 WP_017366871.1 YfhJ family protein -
  BS467_RS00175 (BS467_00175) - 32099..32248 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  BS467_RS00180 (BS467_00180) - 32274..32447 (+) 174 WP_003217811.1 YpzG family protein -
  BS467_RS00185 (BS467_00185) - 32471..32785 (-) 315 WP_008341991.1 YfhH family protein -
  BS467_RS00190 (BS467_00190) recX 32789..33580 (-) 792 WP_017358838.1 recombination regulator RecX Regulator
  BS467_RS00195 (BS467_00195) - 33676..34572 (+) 897 WP_024720284.1 TIGR01777 family oxidoreductase -
  BS467_RS00200 (BS467_00200) - 34625..34735 (+) 111 WP_017358836.1 YfhE family protein -
  BS467_RS00205 (BS467_00205) - 34797..34952 (+) 156 WP_008341997.1 YfhD family protein -
  BS467_RS00210 (BS467_00210) - 34988..35575 (-) 588 WP_024720283.1 nitroreductase family protein -
  BS467_RS00215 (BS467_00215) - 35846..37102 (+) 1257 WP_008341668.1 transcriptional regulator -
  BS467_RS00220 (BS467_00220) - 37138..37605 (-) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  BS467_RS00225 (BS467_00225) - 37944..38492 (-) 549 WP_008341670.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=208961 BS467_RS00190 WP_017358838.1 32789..33580(-) (recX) [Bacillus altitudinis strain GLB197]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=208961 BS467_RS00190 WP_017358838.1 32789..33580(-) (recX) [Bacillus altitudinis strain GLB197]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTTGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAGCAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment