Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BJD11_RS06620 Genome accession   NZ_CP018467
Coordinates   980697..981098 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas euvesicatoria strain LMG930     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 975697..986098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJD11_RS06590 (BJD11_06600) tsaB 976396..977115 (+) 720 WP_011348246.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  BJD11_RS06595 (BJD11_06605) - 977112..977468 (+) 357 Protein_808 ADP-ribosylglycohydrolase family protein -
  BJD11_RS06605 (BJD11_06615) - 977739..978296 (+) 558 Protein_809 ADP-ribosylglycohydrolase family protein -
  BJD11_RS06610 (BJD11_06620) - 978638..979513 (-) 876 WP_011348243.1 energy transducer TonB -
  BJD11_RS06615 (BJD11_06625) gshB 979510..980460 (-) 951 WP_008575184.1 glutathione synthase -
  BJD11_RS06620 (BJD11_06630) pilG 980697..981098 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  BJD11_RS06625 (BJD11_06635) - 981116..981478 (+) 363 WP_005913708.1 response regulator -
  BJD11_RS06630 (BJD11_06640) - 981478..982008 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  BJD11_RS06635 (BJD11_06645) - 982048..984084 (+) 2037 WP_008575181.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=208823 BJD11_RS06620 WP_005913706.1 980697..981098(+) (pilG) [Xanthomonas euvesicatoria strain LMG930]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=208823 BJD11_RS06620 WP_005913706.1 980697..981098(+) (pilG) [Xanthomonas euvesicatoria strain LMG930]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment