Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BSL40_RS02165 Genome accession   NZ_CP018454
Coordinates   416941..417537 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain SWU01     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 411941..422537
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSL40_RS02140 - 412133..413890 (-) 1758 WP_002898401.1 Lon protease family protein -
  BSL40_RS02145 matP 414076..414528 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  BSL40_RS02150 ompA 414660..415730 (-) 1071 WP_062954987.1 porin OmpA -
  BSL40_RS02155 sulA 416083..416592 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  BSL40_RS02165 sxy/tfoX 416941..417537 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  BSL40_RS02170 yccS 417551..419686 (-) 2136 WP_002898422.1 YccS family putative transporter -
  BSL40_RS02175 - 419704..420150 (-) 447 WP_002898425.1 YccF domain-containing protein -
  BSL40_RS02180 helD 420275..422329 (+) 2055 WP_002898429.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=208790 BSL40_RS02165 WP_004150836.1 416941..417537(+) (sxy/tfoX) [Klebsiella pneumoniae strain SWU01]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=208790 BSL40_RS02165 WP_004150836.1 416941..417537(+) (sxy/tfoX) [Klebsiella pneumoniae strain SWU01]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment