Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CQR34_RS09000 Genome accession   NZ_CP023814
Coordinates   1510693..1511154 (+) Length   153 a.a.
NCBI ID   WP_002212941.1    Uniprot ID   A1KUS7
Organism   Neisseria meningitidis strain M26417     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1505693..1516154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQR34_RS08970 (CQR34_08970) - 1506820..1507029 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  CQR34_RS08975 (CQR34_08975) - 1507374..1508180 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  CQR34_RS08980 (CQR34_08980) - 1508238..1509503 (-) 1266 WP_002221776.1 Glu/Leu/Phe/Val dehydrogenase -
  CQR34_RS08995 (CQR34_08995) - 1509910..1510620 (+) 711 WP_002221774.1 phosphoglycolate phosphatase -
  CQR34_RS09000 (CQR34_09000) recX 1510693..1511154 (+) 462 WP_002212941.1 recombination regulator RecX Regulator
  CQR34_RS09005 (CQR34_09005) - 1511228..1511389 (+) 162 WP_002221773.1 hypothetical protein -
  CQR34_RS09015 (CQR34_09015) - 1511542..1512024 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  CQR34_RS09020 (CQR34_09020) - 1512385..1513632 (-) 1248 WP_002239875.1 M23 family metallopeptidase -
  CQR34_RS09025 (CQR34_09025) surE 1513888..1514634 (-) 747 WP_002220609.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17761.04 Da        Isoelectric Point: 9.9314

>NTDB_id=208675 CQR34_RS09000 WP_002212941.1 1510693..1511154(+) (recX) [Neisseria meningitidis strain M26417]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=208675 CQR34_RS09000 WP_002212941.1 1510693..1511154(+) (recX) [Neisseria meningitidis strain M26417]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KUS7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974