Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   CPQ91_RS21330 Genome accession   NZ_CP023729
Coordinates   4101538..4102224 (-) Length   228 a.a.
NCBI ID   WP_003177739.1    Uniprot ID   Q65D38
Organism   Bacillus licheniformis strain ATCC 9789     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 4096538..4107224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS21315 (CPQ91_21315) - 4097736..4099676 (-) 1941 WP_003177730.1 FtsX-like permease family protein -
  CPQ91_RS21320 (CPQ91_21320) - 4099666..4100427 (-) 762 WP_003177734.1 ABC transporter ATP-binding protein -
  CPQ91_RS21325 (CPQ91_21325) - 4100528..4101532 (-) 1005 WP_061578205.1 sensor histidine kinase -
  CPQ91_RS21330 (CPQ91_21330) braR 4101538..4102224 (-) 687 WP_003177739.1 response regulator transcription factor Regulator
  CPQ91_RS21335 (CPQ91_21335) - 4102335..4103744 (-) 1410 WP_009329956.1 glycoside hydrolase family 1 protein -
  CPQ91_RS21340 (CPQ91_21340) - 4103785..4105629 (-) 1845 WP_003177744.1 beta-glucoside-specific PTS transporter subunit IIABC -
  CPQ91_RS21345 (CPQ91_21345) - 4106085..4106501 (-) 417 WP_003177748.1 hypothetical protein -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26716.64 Da        Isoelectric Point: 5.2020

>NTDB_id=208525 CPQ91_RS21330 WP_003177739.1 4101538..4102224(-) (braR) [Bacillus licheniformis strain ATCC 9789]
MFKLLLIEDDESLFQEIKERLTGWSYEVYGINDFSEVMQEFAAIKPDCVIIDIQLPKYDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQFGADDYIQKPFHFDVLIAKIQAIFRRVYDYNTEPEILKKTWCGATVDPEQNRVSNKAGAIELTRNEMF
ILKQLIDQKNKIVSREELMRSLWNDERFVSDNTLTVNVNRLRKKLDALNLGQYIETKVGQGYMAKEEG

Nucleotide


Download         Length: 687 bp        

>NTDB_id=208525 CPQ91_RS21330 WP_003177739.1 4101538..4102224(-) (braR) [Bacillus licheniformis strain ATCC 9789]
ATGTTTAAACTGCTGTTGATAGAAGATGATGAATCGCTGTTTCAAGAAATAAAAGAGCGGTTAACCGGGTGGTCATACGA
GGTATACGGCATCAACGATTTCAGCGAAGTGATGCAGGAGTTTGCGGCGATTAAGCCAGACTGCGTCATCATCGATATTC
AGCTGCCTAAATATGACGGGTTTCATTGGTGCCGGCAGATCCGCTCCCGTTCCAACGTTCCGATTCTCTTTTTATCTTCG
CGCGATCATCCTGCTGATATGGTCATGTCCATGCAGTTCGGAGCGGATGATTATATTCAGAAGCCGTTTCATTTTGACGT
GCTGATTGCCAAGATCCAGGCGATTTTCCGTCGCGTCTACGACTATAATACAGAGCCTGAGATTCTTAAAAAAACGTGGT
GCGGTGCAACCGTTGATCCCGAACAAAACCGCGTCAGCAATAAGGCGGGGGCGATCGAACTGACAAGGAATGAAATGTTC
ATTTTAAAACAATTGATCGACCAAAAAAACAAAATTGTCAGCAGGGAAGAATTGATGAGAAGCCTATGGAACGATGAACG
CTTTGTCAGCGATAACACGCTGACAGTCAACGTAAACCGCTTAAGAAAAAAACTCGATGCCTTGAACTTGGGGCAATATA
TCGAGACGAAGGTCGGCCAGGGCTATATGGCGAAAGAAGAAGGATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65D38

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.724

96.93

0.395


Multiple sequence alignment