Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC   Type   Machinery gene
Locus tag   CPQ91_RS13740 Genome accession   NZ_CP023729
Coordinates   2629701..2632088 (-) Length   795 a.a.
NCBI ID   WP_009327865.1    Uniprot ID   Q8VQ75
Organism   Bacillus licheniformis strain ATCC 9789     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2624701..2637088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS13710 (CPQ91_13710) - 2624970..2625293 (-) 324 WP_003183676.1 YqxA family protein -
  CPQ91_RS13715 (CPQ91_13715) spoIIP 2625309..2626514 (-) 1206 WP_021837575.1 stage II sporulation protein P -
  CPQ91_RS13720 (CPQ91_13720) gpr 2626633..2627739 (-) 1107 WP_009327867.1 GPR endopeptidase -
  CPQ91_RS13725 (CPQ91_13725) rpsT 2627944..2628210 (+) 267 WP_003183682.1 30S ribosomal protein S20 -
  CPQ91_RS13730 (CPQ91_13730) holA 2628272..2629315 (-) 1044 WP_009327866.1 DNA polymerase III subunit delta -
  CPQ91_RS13735 (CPQ91_13735) - 2629545..2629676 (+) 132 WP_003183686.1 YqzM family protein -
  CPQ91_RS13740 (CPQ91_13740) comEC 2629701..2632088 (-) 2388 WP_009327865.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  CPQ91_RS13745 (CPQ91_13745) - 2632092..2632661 (-) 570 WP_003183690.1 ComE operon protein 2 -
  CPQ91_RS13750 (CPQ91_13750) comEA 2632730..2633359 (-) 630 WP_003183693.1 helix-hairpin-helix domain-containing protein Machinery gene
  CPQ91_RS13755 (CPQ91_13755) comER 2633443..2634264 (+) 822 WP_009327864.1 late competence protein ComER -
  CPQ91_RS13760 (CPQ91_13760) - 2634334..2635089 (-) 756 WP_011198132.1 class I SAM-dependent DNA methyltransferase -
  CPQ91_RS13765 (CPQ91_13765) rsfS 2635086..2635442 (-) 357 WP_003183699.1 ribosome silencing factor -
  CPQ91_RS13770 (CPQ91_13770) yqeK 2635456..2636019 (-) 564 WP_003183701.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  CPQ91_RS13775 (CPQ91_13775) - 2636009..2636578 (-) 570 WP_003183702.1 nicotinate-nucleotide adenylyltransferase -
  CPQ91_RS13780 (CPQ91_13780) yhbY 2636597..2636887 (-) 291 WP_003183704.1 ribosome assembly RNA-binding protein YhbY -

Sequence


Protein


Download         Length: 795 a.a.        Molecular weight: 87815.76 Da        Isoelectric Point: 8.3336

>NTDB_id=208484 CPQ91_RS13740 WP_009327865.1 2629701..2632088(-) (comEC) [Bacillus licheniformis strain ATCC 9789]
MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFKKQILLFALCAAVCILYFTSFYVIDHFNTTIYHEGKFH
TLASVQDIPVIDGDRLSFTAETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQGELKEPKKETVPGTFNQKESMYQKG
IHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMADSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLH
VGLLSAALFYIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLSKKNFKSADVISIACLGLLLYH
PYLLFQAGFQLSFAVSFVFILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMPL
SFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIP
SGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDFSLGESVLMPFLAT
KGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVPKGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLS
PKEADKNSKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHGSKGSTGEELIKQIEPKTALISAG
EHNRYGHPHGEVLDILNRHDVKVFRTDRHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE

Nucleotide


Download         Length: 2388 bp        

>NTDB_id=208484 CPQ91_RS13740 WP_009327865.1 2629701..2632088(-) (comEC) [Bacillus licheniformis strain ATCC 9789]
ATGGACAGACATCGCATCTTCCCGTGCGGAGCGATTTCAGCGGCAGCCGGAATCGCCTCCGCTCACTCTTCTCTTTATCT
CTTCCTCGCCGTCGGTTTTTTTCTGTTCTTTATCCTCTGTTTCTTCAAAAAACAAATACTCCTTTTCGCTTTATGTGCAG
CGGTTTGTATTTTATATTTTACTTCTTTTTACGTGATCGACCATTTCAATACAACGATTTATCATGAAGGCAAATTTCAC
ACGCTCGCTTCTGTTCAGGATATTCCCGTAATAGACGGAGACCGGCTTTCTTTCACAGCCGAAACAGATGAGGGAGAAGC
TTTGAAAGCGGGATATACGCTCCGGTCTCCACAAGAAAAACGGGCGCTCTCAGCTCTTCAGCCGGGCAGCCTCTGTGTCA
TGCAAGGTGAATTAAAAGAGCCGAAAAAAGAGACGGTTCCTGGCACTTTTAATCAAAAAGAATCCATGTATCAAAAAGGG
ATTCACTGGATTTTTGCAGTTCAGTCTATTACAAGCTGCAAGCCGGGCGGCGGCCTGATGCCATCTCTATTGAAAATCAG
AAAAGCGGGCCTTGATTTTATAGAGGAAAATATGGCGGACTCGGCTGCCGGTATTGGAAGAGCGCTAATTTTCGGAGACC
GGTTTCTCATTGAACAAGATGTCCTGGACGGCTATCAGCGTCTTGGAATCATTCACCTTTTAGCGATTTCCGGGCTTCAT
GTCGGTCTGCTCTCAGCCGCTCTGTTTTACATATTTATTCGCTTCGGCGTCACGAGGGAATGCGCAAAATGGCTGCTCGT
GATCGGCCTTCCCGTTGCCGCAGTTTTGACCGGAGGCGCCCCGTCGGTGATGAGAGCGGTTTTCATGTCTGAAATCTATC
TGCTGGCATCACTGTCTAAAAAGAACTTCAAAAGTGCCGATGTGATCAGCATTGCCTGCCTCGGACTGCTGCTGTATCAT
CCTTATCTGTTATTTCAAGCCGGATTCCAGCTTTCTTTTGCTGTATCCTTCGTTTTCATTCTTTCAAAGGAGATATTGAC
CAGGCCGAAAAGCCGAATCTCTCAGCTGCTATTGGGGTCATTTTTGGCTCAGCTCGCTTCCCTCCCGATTCTGCTTTTTC
ATTTTCAAGAGTTTTCATTTCTCAGCACATTAATGAATCTATTTTTTATACCTCTTTATATTTTCATCATCATGCCGCTG
TCTTTCGGAAGCCTGCTTGCTTTCATATGTTTTCATCCCTTGGGGGAGGCGGCAGCCGCCGTTCTTGACCGTCTGCTTGT
GTGGAGCCATCAGGCTGTTAAAACGGTGTCTGCCGCGGATGTTTCGGTCTTTTCTGCGGCTAAGCCGCCGGATCTTTTGT
TGTTTTTCTACTTCACAGCCATTTTTCTGTTTTTGCTGTTGCTGGAAAAAGAGATGTCGCTTCGTGCGGTCATGATTCCG
TCCGGCCTGCTTGCTGCTGTGTTTGTGATTCACGCATGTCTTCCTCAGCTTGCAGGTGAGGGAGAGGTTACAATGCTTGA
TATCGGCCAAGGGGACAGCATGTATGTCAGCGCTCCCGGTCAGAATGGCACGGTCTTCATTGATACGGGAGGAACCGTAT
CCTTCCGGAAAGAGCGGTGGAGAAAGCGGAAGAAGGATTTTTCATTGGGGGAGAGCGTGTTAATGCCTTTTCTGGCAACC
AAAGGGGTCAAGAAGCTCGATGCTTTAATTTTGACCCATGCTGATCAGGATCATATCGGTGAAGCGCATGTGCTGATCCA
AAAACATAAAGTGAAGCAATTGATCGTGCCGAAAGGCTTCGCAGCCGAACCGTCTGATGAAAAGCTGCTTCGCCTTGCCT
TGAAGGAAGGCGTCGAGGTGAATGTAGCCAAAAGAGGTGACATCCTTCATATTGGCAATCTTGAATTTTATGTTCTTTCA
CCGAAAGAGGCGGACAAAAACAGCAAAAACAATGGTTCCCTCGTATTGTGGATGAAAGCAGGCGGATTTTCGTGGCTGTT
AACTGGAGATTTGGAGAAGGAGGGCGAAAAGGAGATGATGGAAGTGTATCCGAATCTTAAAGCGGATATTCTGAAAGTCG
GTCACCATGGAAGCAAAGGTTCGACGGGTGAAGAGCTGATCAAGCAAATTGAGCCGAAAACCGCCCTCATTTCGGCGGGG
GAGCACAACCGCTACGGGCATCCCCACGGGGAAGTGCTGGACATCCTAAACCGCCACGATGTGAAGGTGTTCAGAACGGA
TCGGCACGGTTCGATTCAGCACCTATTTCGAGGCGGGAACGGAACGTTTTTGCTACATCCTCCATATGATAAAGTACATT
CCCCGCAAGAAAAAATGACTGCTGAAAAACAGCAGTCGTCAAAAAGCCGCTTGCCTGACGGAGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8VQ75

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

48.235

96.226

0.464


Multiple sequence alignment