Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   CPQ91_RS06360 Genome accession   NZ_CP023729
Coordinates   1264934..1266082 (+) Length   382 a.a.
NCBI ID   WP_061578469.1    Uniprot ID   -
Organism   Bacillus licheniformis strain ATCC 9789     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1259934..1271082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS06340 (CPQ91_06340) - 1260479..1260934 (+) 456 WP_061578470.1 tripartite tricarboxylate transporter TctB family protein -
  CPQ91_RS06345 (CPQ91_06345) - 1260957..1262462 (+) 1506 WP_016885905.1 tripartite tricarboxylate transporter permease -
  CPQ91_RS06350 (CPQ91_06350) - 1262482..1263198 (-) 717 WP_061576210.1 response regulator -
  CPQ91_RS06355 (CPQ91_06355) - 1263221..1264816 (-) 1596 WP_009328826.1 ATP-binding protein -
  CPQ91_RS06360 (CPQ91_06360) coiA 1264934..1266082 (+) 1149 WP_061578469.1 competence protein CoiA family protein Machinery gene
  CPQ91_RS06365 (CPQ91_06365) pepF 1266295..1268124 (+) 1830 WP_282334326.1 oligoendopeptidase F Regulator
  CPQ91_RS22585 (CPQ91_06370) - 1268181..1268348 (-) 168 WP_009328823.1 hypothetical protein -
  CPQ91_RS06375 (CPQ91_06375) spxH 1268760..1269662 (-) 903 WP_009328822.1 protease adaptor protein SpxH -
  CPQ91_RS06380 (CPQ91_06380) - 1269659..1270057 (-) 399 WP_003180652.1 thiol management oxidoreductase -
  CPQ91_RS06385 (CPQ91_06385) - 1270339..1270992 (-) 654 WP_009328821.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 44647.01 Da        Isoelectric Point: 9.9815

>NTDB_id=208435 CPQ91_RS06360 WP_061578469.1 1264934..1266082(+) (coiA) [Bacillus licheniformis strain ATCC 9789]
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYIFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=208435 CPQ91_RS06360 WP_061578469.1 1264934..1266082(+) (coiA) [Bacillus licheniformis strain ATCC 9789]
ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG
AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG
CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC
GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT
GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG
GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG
CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC
TTTCATCATCCTCGAACACCTCATTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG
CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT
CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT
CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT
ACATTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC
AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA
AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA
AAAGGGATGAACATTATTTTTCCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

42.033

95.288

0.401


Multiple sequence alignment