Detailed information NTG0208417

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CPQ91_RS05385
• Genome accession: NZ_CP023729
• Coordinates: 1064656..1065774 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain ATCC 9789
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1059656..1070774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPQ91_RS05360 (CPQ91_05360)	-	1059856..1061361 (+)	1506	WP_029327040.1	coproporphyrinogen III oxidase	-
CPQ91_RS05365 (CPQ91_05365)	-	1061443..1062654 (-)	1212	WP_061578482.1	cation:proton antiporter	-
CPQ91_RS05370 (CPQ91_05370)	-	1062661..1063158 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
CPQ91_RS05375 (CPQ91_05375)	-	1063223..1063552 (-)	330	WP_016886161.1	hypothetical protein	-
CPQ91_RS05380 (CPQ91_05380)	-	1063753..1064529 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
CPQ91_RS05385 (CPQ91_05385)	rapC	1064656..1065774 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
CPQ91_RS22245	-	1065764..1065901 (+)	138	WP_016886158.1	hypothetical protein	-
CPQ91_RS05390 (CPQ91_05390)	-	1065906..1066184 (+)	279	WP_097366375.1	hypothetical protein	-
CPQ91_RS05395 (CPQ91_05395)	-	1066259..1066444 (-)	186	WP_003180228.1	YhzD family protein	-
CPQ91_RS05400 (CPQ91_05400)	-	1066562..1067458 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
CPQ91_RS05405 (CPQ91_05405)	-	1067451..1068719 (+)	1269	WP_003180232.1	ABC transporter permease	-
CPQ91_RS05410 (CPQ91_05410)	-	1068839..1070065 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=208417 CPQ91_RS05385 WP_009328956.1 1064656..1065774(+) (rapC) [Bacillus licheniformis strain ATCC 9789]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=208417 CPQ91_RS05385 WP_009328956.1 1064656..1065774(+) (rapC) [Bacillus licheniformis strain ATCC 9789]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374