Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CPC18_RS03970 Genome accession   NZ_CP023561
Coordinates   801429..802232 (+) Length   267 a.a.
NCBI ID   WP_033846823.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TF3198     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 796429..807232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPC18_RS03950 (CPC18_03935) - 797975..799312 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  CPC18_RS03955 (CPC18_03940) tmk 799314..799931 (+) 618 WP_001272126.1 dTMP kinase -
  CPC18_RS03960 (CPC18_03945) - 799959..800288 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  CPC18_RS03965 (CPC18_03950) - 800502..801428 (+) 927 WP_148121233.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  CPC18_RS03970 (CPC18_03955) yaaT 801429..802232 (+) 804 WP_033846823.1 stage 0 sporulation family protein Regulator
  CPC18_RS03975 (CPC18_03960) yabA 802249..802596 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  CPC18_RS03980 (CPC18_03965) - 802870..803595 (+) 726 WP_000910689.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CPC18_RS03985 (CPC18_03970) - 803588..803836 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  CPC18_RS03990 (CPC18_03975) rsmI 803838..804677 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CPC18_RS03995 (CPC18_03980) metG 804962..806935 (+) 1974 WP_001051116.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30233.83 Da        Isoelectric Point: 4.4910

>NTDB_id=208235 CPC18_RS03970 WP_033846823.1 801429..802232(+) (yaaT) [Staphylococcus aureus strain TF3198]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAELLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=208235 CPC18_RS03970 WP_033846823.1 801429..802232(+) (yaaT) [Staphylococcus aureus strain TF3198]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCGAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

61.977

98.502

0.61

Multiple sequence alignment