Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CPG33_RS00940 | Genome accession | NZ_CP023543 |
| Coordinates | 178819..179202 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain CFSAN032806 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 173819..184202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPG33_RS00920 (CPG33_00920) | - | 173898..175832 (-) | 1935 | WP_057036753.1 | ribonuclease R family protein | - |
| CPG33_RS00925 (CPG33_00925) | ilvC | 175951..176973 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| CPG33_RS00930 (CPG33_00930) | - | 176977..178059 (+) | 1083 | WP_002874286.1 | divergent polysaccharide deacetylase family protein | - |
| CPG33_RS00935 (CPG33_00935) | dprA | 178049..178822 (+) | 774 | WP_002875504.1 | DNA-processing protein DprA | Machinery gene |
| CPG33_RS00940 (CPG33_00940) | dprB | 178819..179202 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| CPG33_RS00945 (CPG33_00945) | - | 179231..180070 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| CPG33_RS00950 (CPG33_00950) | msrA | 180246..180743 (-) | 498 | WP_002875505.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| CPG33_RS00955 (CPG33_00955) | ppa | 180785..181303 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| CPG33_RS00960 (CPG33_00960) | adk | 181313..181891 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| CPG33_RS00965 (CPG33_00965) | aspS | 181888..183639 (-) | 1752 | WP_002875506.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=208138 CPG33_RS00940 WP_002852281.1 178819..179202(+) (dprB) [Campylobacter jejuni strain CFSAN032806]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=208138 CPG33_RS00940 WP_002852281.1 178819..179202(+) (dprB) [Campylobacter jejuni strain CFSAN032806]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGCGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TTATTGTAGGCATTCCTAAGGGCGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |