Detailed information NTG0208009

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BSZ04_RS22265
• Genome accession: NZ_CP018312
• Coordinates: 2830592..2831599 (+)
• Length: 335 a.a.
• NCBI ID: WP_045386374.1
• Uniprot ID: A0A510I363
• Organism: Vibrio rotiferianus strain B64D1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2825592..2836599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSZ04_RS22240 (BSZ04_21965)	rplD	2825638..2826240 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
BSZ04_RS22245 (BSZ04_21970)	rplC	2826258..2826887 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
BSZ04_RS22250 (BSZ04_21975)	rpsJ	2826902..2827213 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
BSZ04_RS22255 (BSZ04_21980)	rpmE	2827670..2827888 (-)	219	WP_010445294.1	50S ribosomal protein L31	-
BSZ04_RS22260 (BSZ04_21985)	priA	2828186..2830387 (+)	2202	WP_088881384.1	primosomal protein N'	-
BSZ04_RS22265 (BSZ04_21990)	cytR	2830592..2831599 (+)	1008	WP_045386374.1	DNA-binding transcriptional regulator CytR	Regulator
BSZ04_RS22270 (BSZ04_21995)	ftsN	2831736..2832281 (+)	546	WP_088881385.1	cell division protein FtsN	-
BSZ04_RS22275 (BSZ04_22000)	hslV	2832482..2833033 (+)	552	WP_009698878.1	ATP-dependent protease subunit HslV	-
BSZ04_RS22280 (BSZ04_22005)	hslU	2833063..2834394 (+)	1332	WP_010445268.1	HslU--HslV peptidase ATPase subunit	-
BSZ04_RS22285 (BSZ04_22010)	-	2834707..2835624 (+)	918	WP_010445265.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BSZ04_RS22290 (BSZ04_22015)	rraA	2835700..2836224 (+)	525	WP_010445263.1	ribonuclease E activity regulator RraA	-
BSZ04_RS22295 (BSZ04_22020)	zapB	2836288..2836530 (-)	243	WP_010445262.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36862.42 Da
• Isoelectric Point: 6.2459

>NTDB_id=208009 BSZ04_RS22265 WP_045386374.1 2830592..2831599(+) (cytR) [Vibrio rotiferianus strain B64D1]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPESAALCQFRQQGYQQALRRAGITKEAQYSIVTDFTFEGGAQAIRKLLELPEPPTA
VFCHCDTMAIGAIQEAKRLGLRVPQDISIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=208009 BSZ04_RS22265 WP_045386374.1 2830592..2831599(+) (cytR) [Vibrio rotiferianus strain B64D1]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTCTCTACCGCAACCGTGTCGCGAGCTCTGATGAATCCGGAAAA
AGTATCATCATCGACACGAAAAAGAGTAGAAGATGCAGTACTTGAAGCTGGCTACTCACCGAATTCATTAGCACGCAACT
TACGTAGAAATGAATCAAAAACCATTGTCACTATAGTTCCCGACATCTGCGATCCGTACTTTTCTGAAATCATTCGTGGT
ATCGAAGATGCAGCAATGGAACATGGCTACCTAGTCCTACTGGGCGACAGTGGTCAACAGAAAAAACGAGAAAGCTCATT
TGTAAACCTCGTCTTTACCAAACAAGCTGATGGCATGCTACTGCTTGGCACCGATTTACCATTCGATGTCAGCAAGCCAG
AACAGAAAAACTTACCACCTATGGTGATGGCTTGTGAGTTTGCTCCTGAGCTAGAACTGCCAACCGTACACATTGATAAC
CTAACCTCTGCTTTTGAAGCCGTGAACTACCTAACTCAATTAGGCCATAAGCGTATCGCTCAAATCTCTGGTCCAGAGAG
TGCTGCACTATGCCAATTCCGTCAGCAGGGTTACCAACAGGCGTTACGTCGTGCGGGCATTACTAAAGAAGCACAATACA
GTATCGTTACTGACTTCACCTTTGAAGGCGGTGCACAAGCAATCCGTAAACTACTCGAACTACCAGAGCCACCTACCGCT
GTATTCTGTCATTGTGACACCATGGCTATTGGTGCGATCCAAGAAGCAAAACGCCTAGGATTGAGAGTTCCACAAGACAT
CTCAATTGTTGGGTTTGACGATATCCAATTTGCTCAGTACTGCGATCCACCGTTAACTACCATCTCGCAACCTCGTTATG
AGATCGGTCGCCAAGCCATGCTAATGATGCTAGAGCTGTTAAAAGGTCATGATGTACACTCCGGCTCTCGCTTACTTGAG
ACCAAACTTGTTGTTCGAGGTAGTGCTGCTCCACCACCATTACGCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A510I363

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	94.88	99.104	0.94
cytR	Vibrio cholerae C6706	91.265	99.104	0.904