Detailed information
Bioinformatically predicted
Overview
| Name | cqsS | Type | Regulator |
| Locus tag | BSZ04_RS07530 | Genome accession | NZ_CP018311 |
| Coordinates | 1606620..1608665 (+) | Length | 681 a.a. |
| NCBI ID | WP_088880250.1 | Uniprot ID | - |
| Organism | Vibrio rotiferianus strain B64D1 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1601620..1613665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSZ04_RS07510 (BSZ04_07445) | - | 1601850..1602440 (-) | 591 | WP_071234391.1 | LemA family protein | - |
| BSZ04_RS07515 (BSZ04_07450) | dcuC | 1602669..1604036 (-) | 1368 | WP_010452174.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
| BSZ04_RS07520 (BSZ04_07455) | - | 1604412..1605536 (-) | 1125 | WP_088880035.1 | acyl-CoA desaturase | - |
| BSZ04_RS07525 (BSZ04_07460) | - | 1605828..1606376 (+) | 549 | WP_010452170.1 | GNAT family N-acetyltransferase | - |
| BSZ04_RS07530 (BSZ04_07465) | cqsS | 1606620..1608665 (+) | 2046 | WP_088880250.1 | hybrid sensor histidine kinase/response regulator | Regulator |
| BSZ04_RS07535 (BSZ04_07470) | cqsA | 1608712..1609893 (-) | 1182 | WP_088880036.1 | alpha-hydroxyketone-type quorum-sensing autoinducer synthase | Regulator |
| BSZ04_RS07540 (BSZ04_07475) | ylqF | 1610190..1611134 (-) | 945 | WP_088880037.1 | ribosome biogenesis GTPase YlqF | - |
| BSZ04_RS07545 (BSZ04_07480) | - | 1611733..1612803 (+) | 1071 | WP_088880038.1 | lipocalin-like domain-containing protein | - |
Sequence
Protein
Download Length: 681 a.a. Molecular weight: 78451.37 Da Isoelectric Point: 5.4046
>NTDB_id=207972 BSZ04_RS07530 WP_088880250.1 1606620..1608665(+) (cqsS) [Vibrio rotiferianus strain B64D1]
MDALRKVYQYAEPNLTLVGWMGFVGFPTYFIVWEYLFPQPYENLPLRLFCSLLFLGIIVRNKLSSRLKANMHWYYQFAIT
LCLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHITRVMFIQTFVGVFLATFFAWASKGFHLHITMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLCSSIDVMQSIIPDPKQEKKDTYQLSIEDIELLREISDDAMK
MIQSGNETIDLLLTSIDENRVSRATFKKHNVQQVIENAIESFSYKRASDRAAISIDIRSSFDFLGSDTLLKYVVYNLFKN
AFHHRSSEDFHIHVTVESNDNANRIVVTDNGAGISVDALENIFRDFYTTGKSGNYGLGLPFCKKVMRSFGGDIKCVSELG
EWSQFTLTFPLLNSPVVEEIKDELIKLKSILLISNQKILVSKATDLSRHMGFQFDVINTLDVFNKKEYEFEYDVIFVDLE
SIDIRGTQLDRIESLLSFTEGRIVYLFQQHSPSRPIKAGYFPIWMETQAWLLNTYTTIERLLFDVDYESAAAPIREIEHD
NRRTIMVVDDNESLRKFTALLLEKQGFDVIQKEDGEQALEALSSESIDLILMDIEMPVMDGIETSRKIRSSKCAYSTIPI
IAHTGDSSPVTLEKIESSGMSDFIVKPADKARLFDKIAHWI
MDALRKVYQYAEPNLTLVGWMGFVGFPTYFIVWEYLFPQPYENLPLRLFCSLLFLGIIVRNKLSSRLKANMHWYYQFAIT
LCLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHITRVMFIQTFVGVFLATFFAWASKGFHLHITMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLCSSIDVMQSIIPDPKQEKKDTYQLSIEDIELLREISDDAMK
MIQSGNETIDLLLTSIDENRVSRATFKKHNVQQVIENAIESFSYKRASDRAAISIDIRSSFDFLGSDTLLKYVVYNLFKN
AFHHRSSEDFHIHVTVESNDNANRIVVTDNGAGISVDALENIFRDFYTTGKSGNYGLGLPFCKKVMRSFGGDIKCVSELG
EWSQFTLTFPLLNSPVVEEIKDELIKLKSILLISNQKILVSKATDLSRHMGFQFDVINTLDVFNKKEYEFEYDVIFVDLE
SIDIRGTQLDRIESLLSFTEGRIVYLFQQHSPSRPIKAGYFPIWMETQAWLLNTYTTIERLLFDVDYESAAAPIREIEHD
NRRTIMVVDDNESLRKFTALLLEKQGFDVIQKEDGEQALEALSSESIDLILMDIEMPVMDGIETSRKIRSSKCAYSTIPI
IAHTGDSSPVTLEKIESSGMSDFIVKPADKARLFDKIAHWI
Nucleotide
Download Length: 2046 bp
>NTDB_id=207972 BSZ04_RS07530 WP_088880250.1 1606620..1608665(+) (cqsS) [Vibrio rotiferianus strain B64D1]
ATGGATGCATTGCGTAAGGTATACCAGTATGCAGAGCCGAATCTGACGTTAGTTGGTTGGATGGGGTTTGTTGGCTTTCC
GACGTACTTTATTGTATGGGAGTACTTGTTCCCACAGCCATACGAAAACTTACCGCTGCGCTTGTTTTGCTCACTTCTAT
TTCTCGGGATTATCGTTAGAAACAAATTAAGCTCTCGCCTAAAAGCAAACATGCATTGGTACTATCAGTTTGCTATAACC
CTTTGCTTACCATTTTTCTTTTTCTATATGTTGCTGATGAATGATTGGTCCAATGTTTGGGTTATGTCATTTATGTCGGC
GATTTTTTTGCATATCCTTTTGGTCCATATCACTCGAGTGATGTTTATCCAAACGTTCGTTGGGGTTTTTCTGGCTACGT
TTTTTGCGTGGGCCTCGAAAGGGTTTCACCTGCATATAACGATGGATTGGACTCATGTTCCGATCTTTTTGTTTATCTAT
CTTTTTGGCAATCTATTTTATTTTAGAAACCAAGTTGAACATGAAGCGAAAGTATCAATAGCTAAGTCATTTGGAGCGGG
GATTGCTCACGAAATGCGTAACCCGTTAAGCGGGCTTTGCTCTTCCATCGATGTGATGCAGTCAATTATTCCAGATCCAA
AACAAGAGAAAAAAGACACTTATCAACTGTCCATTGAAGATATTGAGTTATTGCGCGAGATTAGCGATGACGCAATGAAA
ATGATTCAGTCAGGTAATGAGACTATCGATTTGTTGCTGACATCAATAGATGAGAATAGAGTTTCTCGCGCTACCTTTAA
AAAGCATAATGTCCAACAAGTGATTGAAAATGCAATTGAAAGTTTCAGTTACAAGCGAGCGTCAGATAGGGCGGCAATAT
CAATCGATATCCGGAGTAGCTTTGACTTTTTAGGTAGTGACACTTTGTTAAAGTACGTAGTTTACAACCTATTTAAAAAT
GCATTTCATCATCGCAGTTCAGAAGACTTCCATATTCACGTGACCGTTGAGTCGAACGATAATGCCAACCGCATTGTTGT
TACTGATAATGGGGCTGGGATCTCGGTTGATGCTCTTGAAAACATTTTTAGGGACTTCTATACAACTGGTAAATCTGGAA
ATTATGGGCTTGGCTTACCATTTTGTAAGAAGGTCATGCGCTCCTTCGGTGGTGATATTAAATGTGTCTCTGAGCTTGGA
GAGTGGTCTCAATTTACGCTGACATTTCCTCTTCTTAATTCGCCAGTAGTAGAAGAAATAAAGGATGAGTTAATCAAGTT
GAAATCAATACTGTTGATATCTAACCAAAAGATCCTAGTGAGTAAGGCGACAGACTTAAGTCGTCACATGGGGTTTCAGT
TTGATGTTATTAATACGTTGGATGTCTTCAATAAGAAAGAGTACGAGTTCGAGTATGACGTGATTTTTGTCGACCTTGAA
AGTATTGATATCCGAGGAACACAGCTGGATAGAATTGAATCACTTCTATCATTTACAGAAGGGCGAATTGTTTACTTATT
CCAGCAGCATTCACCATCTCGTCCAATTAAGGCTGGTTATTTCCCTATCTGGATGGAGACTCAAGCTTGGTTACTAAACA
CTTACACGACGATCGAACGGTTATTGTTTGATGTTGATTATGAGTCTGCTGCGGCCCCTATTCGAGAAATAGAGCACGAT
AACAGAAGGACTATCATGGTCGTTGACGATAATGAATCGCTACGAAAGTTCACCGCGTTGTTGTTAGAAAAGCAGGGGTT
TGATGTTATTCAGAAAGAAGATGGCGAACAAGCACTGGAAGCTTTGAGTTCTGAAAGTATTGATTTAATTTTAATGGATA
TTGAAATGCCAGTGATGGATGGGATTGAAACATCGCGCAAGATTCGTAGTTCGAAGTGTGCTTACTCGACGATTCCAATT
ATTGCACATACAGGTGATAGCTCACCGGTGACACTTGAAAAGATAGAGTCATCAGGCATGTCTGATTTTATCGTCAAGCC
AGCTGATAAAGCTCGATTGTTTGACAAAATTGCTCATTGGATATAG
ATGGATGCATTGCGTAAGGTATACCAGTATGCAGAGCCGAATCTGACGTTAGTTGGTTGGATGGGGTTTGTTGGCTTTCC
GACGTACTTTATTGTATGGGAGTACTTGTTCCCACAGCCATACGAAAACTTACCGCTGCGCTTGTTTTGCTCACTTCTAT
TTCTCGGGATTATCGTTAGAAACAAATTAAGCTCTCGCCTAAAAGCAAACATGCATTGGTACTATCAGTTTGCTATAACC
CTTTGCTTACCATTTTTCTTTTTCTATATGTTGCTGATGAATGATTGGTCCAATGTTTGGGTTATGTCATTTATGTCGGC
GATTTTTTTGCATATCCTTTTGGTCCATATCACTCGAGTGATGTTTATCCAAACGTTCGTTGGGGTTTTTCTGGCTACGT
TTTTTGCGTGGGCCTCGAAAGGGTTTCACCTGCATATAACGATGGATTGGACTCATGTTCCGATCTTTTTGTTTATCTAT
CTTTTTGGCAATCTATTTTATTTTAGAAACCAAGTTGAACATGAAGCGAAAGTATCAATAGCTAAGTCATTTGGAGCGGG
GATTGCTCACGAAATGCGTAACCCGTTAAGCGGGCTTTGCTCTTCCATCGATGTGATGCAGTCAATTATTCCAGATCCAA
AACAAGAGAAAAAAGACACTTATCAACTGTCCATTGAAGATATTGAGTTATTGCGCGAGATTAGCGATGACGCAATGAAA
ATGATTCAGTCAGGTAATGAGACTATCGATTTGTTGCTGACATCAATAGATGAGAATAGAGTTTCTCGCGCTACCTTTAA
AAAGCATAATGTCCAACAAGTGATTGAAAATGCAATTGAAAGTTTCAGTTACAAGCGAGCGTCAGATAGGGCGGCAATAT
CAATCGATATCCGGAGTAGCTTTGACTTTTTAGGTAGTGACACTTTGTTAAAGTACGTAGTTTACAACCTATTTAAAAAT
GCATTTCATCATCGCAGTTCAGAAGACTTCCATATTCACGTGACCGTTGAGTCGAACGATAATGCCAACCGCATTGTTGT
TACTGATAATGGGGCTGGGATCTCGGTTGATGCTCTTGAAAACATTTTTAGGGACTTCTATACAACTGGTAAATCTGGAA
ATTATGGGCTTGGCTTACCATTTTGTAAGAAGGTCATGCGCTCCTTCGGTGGTGATATTAAATGTGTCTCTGAGCTTGGA
GAGTGGTCTCAATTTACGCTGACATTTCCTCTTCTTAATTCGCCAGTAGTAGAAGAAATAAAGGATGAGTTAATCAAGTT
GAAATCAATACTGTTGATATCTAACCAAAAGATCCTAGTGAGTAAGGCGACAGACTTAAGTCGTCACATGGGGTTTCAGT
TTGATGTTATTAATACGTTGGATGTCTTCAATAAGAAAGAGTACGAGTTCGAGTATGACGTGATTTTTGTCGACCTTGAA
AGTATTGATATCCGAGGAACACAGCTGGATAGAATTGAATCACTTCTATCATTTACAGAAGGGCGAATTGTTTACTTATT
CCAGCAGCATTCACCATCTCGTCCAATTAAGGCTGGTTATTTCCCTATCTGGATGGAGACTCAAGCTTGGTTACTAAACA
CTTACACGACGATCGAACGGTTATTGTTTGATGTTGATTATGAGTCTGCTGCGGCCCCTATTCGAGAAATAGAGCACGAT
AACAGAAGGACTATCATGGTCGTTGACGATAATGAATCGCTACGAAAGTTCACCGCGTTGTTGTTAGAAAAGCAGGGGTT
TGATGTTATTCAGAAAGAAGATGGCGAACAAGCACTGGAAGCTTTGAGTTCTGAAAGTATTGATTTAATTTTAATGGATA
TTGAAATGCCAGTGATGGATGGGATTGAAACATCGCGCAAGATTCGTAGTTCGAAGTGTGCTTACTCGACGATTCCAATT
ATTGCACATACAGGTGATAGCTCACCGGTGACACTTGAAAAGATAGAGTCATCAGGCATGTCTGATTTTATCGTCAAGCC
AGCTGATAAAGCTCGATTGTTTGACAAAATTGCTCATTGGATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cqsS | Vibrio cholerae strain A1552 |
48.905 |
100 |
0.492 |