Detailed information NTG0207934

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BSZ05_RS03775
• Genome accession: NZ_CP018308
• Coordinates: 834376..837762 (+)
• Length: 1128 a.a.
• NCBI ID: WP_088876228.1
• Uniprot ID: A0AAN1FEF8
• Organism: Vibrio mediterranei strain QT6D1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 829376..842762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSZ05_RS03755 (BSZ05_03750)	erpA	829704..830045 (-)	342	WP_006072684.1	iron-sulfur cluster insertion protein ErpA	-
BSZ05_RS03760 (BSZ05_03755)	hemL	830349..831641 (+)	1293	WP_006072683.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BSZ05_RS03765 (BSZ05_03760)	-	831980..833053 (+)	1074	WP_006072681.1	AI-2E family transporter	-
BSZ05_RS03770 (BSZ05_03765)	rsmC	833120..834142 (+)	1023	WP_088876227.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BSZ05_RS03775 (BSZ05_03770)	chiS	834376..837762 (+)	3387	WP_088876228.1	response regulator	Regulator
BSZ05_RS03780 (BSZ05_03775)	acnB	837863..840460 (-)	2598	WP_038224012.1	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127411.24 Da
• Isoelectric Point: 5.3545

>NTDB_id=207934 BSZ05_RS03775 WP_088876228.1 834376..837762(+) (chiS) [Vibrio mediterranei strain QT6D1]
MFKLYRKQKFKRLQNTLMMAFLVLSITPLTVIALFFLNAHSQDLKDQSTSHLVSIRDTKKQQLINYFQAQESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGDDIEQAREHAQERYIQGSGNQVKTAILPDSSSYVGSERYRLLHKRYHRAFMEHLKRSDF
DDIILVDLAGNVTYSVYKNRYYGTNLETGEFSTQILGETFDRLKSEVTHKRKENEEYTPVVISDFALQDDQQYAWLGAPI
IQQGYLHSYAMFRLPIKGITKLITDGKPDDIKLLLVGSDHAAKILGLEQDTIDNSNEVISQALSGLTMVGSYTNAKGEDY
FAAFTPIQLNETNWALVAETPEAIAFASVKQLEKLFVIAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERASGGDLEPS
IISADRKDEIGRLALSFERMRRSIKEKIELIKSQNQELEQNLVTIKKQNEELQLANKLKDEFLATTSHELRTPLHGMIGI
AEAMISGANGPIGANHKYQLDIIVNSGQRLAGLVDDLLDYHKMRYGNLDIERSAISLTGATQLVLELSHHLLGEKKIRII
NQVLEPLPYVSADPQRLEQVLYNLVGNAIKYTNEGKIVLSATAMDDHIRVQVVDTGQGIPAQQLEHIFEPLVQAGHDSGH
YRQGAGLGLSISRQLIELMGGSLYVSSQPHVGTTFSFTLPLATQEEIEHMSQLGQNSHFHIAEPTEINPEEEEVLPENPD
GPVLLVADDEPVNLRILESFLRLEGYQVKLAKDGLETLDIIEHEKPDLLLLDIMMPGMSGFEVCETIREQYDHAALPIIM
LTALNQSEDRVRGFELGANDYLAKPFSKPELAARIAAHLQASKAEERRAENQLLKYEIKQRALVEASLLETQGRLIEQLD
SAPEAILCIREDLKVQFANQSAGRMFKRSVEQLKRSNVEELIAPKFIHLSQEHYCGDIDIFVDDVRQHINTDILTLPEGS
GLKSIYIFEQGQSLDQTRVKNLETAIDALSRYAIEGDKAKLLELKELGGEFTQLADKAVDEEKSRPELMRELLVDTMTNA
LEYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRLETLPKTPRWRTVLSSVEYILDHCHRQGPERDHIIALRD
KLQKLLTN

Nucleotide

• Length: 3387 bp

>NTDB_id=207934 BSZ05_RS03775 WP_088876228.1 834376..837762(+) (chiS) [Vibrio mediterranei strain QT6D1]
ATGTTCAAGTTGTATCGAAAACAGAAATTCAAGCGACTGCAAAACACCTTGATGATGGCTTTTTTGGTGCTCAGCATTAC
ACCCTTGACGGTCATCGCGCTATTTTTTCTCAACGCACACAGTCAGGATTTAAAAGATCAAAGTACCTCTCATCTGGTAT
CGATAAGAGATACTAAAAAACAGCAGTTGATCAACTACTTTCAAGCTCAAGAGTCTGAAGTCATGGGATTCGTACGTTCA
GAGCTCGCTTATGCCAGTGGTGGACGATTCTATGGACTGGTAAATGCGTTCCAGCGCCTCGGTGACGATATAGAACAAGC
AAGAGAACATGCGCAAGAACGCTATATTCAAGGTTCAGGCAATCAAGTAAAAACCGCAATCCTTCCAGACTCTAGTAGTT
ATGTAGGAAGTGAGCGCTACCGTCTTCTACACAAGCGCTATCATAGGGCGTTTATGGAGCACCTGAAACGCTCAGATTTT
GATGACATCATACTGGTCGATCTTGCAGGCAACGTCACCTACTCCGTCTATAAAAATCGCTATTACGGCACAAATTTAGA
AACGGGCGAGTTTTCAACTCAGATCCTTGGCGAAACCTTTGATCGTTTGAAATCTGAAGTCACTCACAAGCGCAAAGAAA
ACGAAGAGTACACCCCGGTTGTTATTTCCGATTTTGCCCTACAAGATGACCAACAGTACGCTTGGCTTGGTGCCCCGATT
ATCCAGCAAGGTTATCTTCACAGTTATGCCATGTTCAGGCTTCCCATCAAGGGAATCACTAAACTCATCACTGACGGCAA
ACCAGATGATATTAAGCTGCTGCTGGTCGGTAGTGACCATGCCGCCAAGATACTTGGGCTTGAACAAGACACCATAGACA
ACAGCAACGAAGTTATCTCACAAGCCTTATCGGGTCTCACCATGGTGGGTAGCTACACCAATGCCAAAGGCGAAGACTAC
TTTGCGGCATTCACTCCTATTCAACTCAATGAAACCAATTGGGCACTGGTTGCCGAAACACCAGAGGCCATCGCCTTTGC
TAGCGTTAAGCAACTAGAAAAACTGTTTGTTATTGCAATGCTGACCGCGATTGTGCTGGTTGTCATTGCTTCACACTACC
TTTCTAACTTTATTACGTCGCCACTGCTTAAGCTTACTTGGGCAGCCGAAAGAGCCTCTGGTGGAGACTTAGAACCTTCG
ATTATTAGCGCAGACCGTAAAGATGAGATTGGCCGATTAGCTCTGAGTTTCGAACGTATGAGGCGCTCAATAAAAGAGAA
AATCGAGCTCATTAAGAGTCAGAACCAAGAGCTAGAGCAGAATTTAGTCACGATTAAAAAGCAAAATGAAGAATTACAGC
TAGCAAACAAGCTGAAAGATGAATTCCTTGCAACCACCTCTCACGAACTTCGCACTCCACTTCACGGCATGATTGGGATT
GCAGAGGCAATGATCTCAGGTGCCAATGGGCCAATCGGCGCCAACCATAAATATCAGCTTGATATCATTGTTAACAGTGG
CCAGCGCCTTGCTGGATTGGTGGACGATCTTCTCGATTATCACAAGATGCGTTACGGCAACTTAGATATTGAACGTTCAG
CTATCAGCTTAACCGGTGCAACACAGCTGGTCTTGGAGCTGTCACATCACTTGCTTGGTGAAAAGAAGATTCGAATTATC
AATCAAGTCCTCGAACCATTGCCTTATGTCTCAGCCGACCCACAGCGCTTAGAACAGGTACTTTATAACCTTGTAGGTAA
TGCCATCAAATACACCAATGAAGGTAAGATCGTATTATCGGCCACCGCCATGGATGATCATATTCGTGTACAAGTAGTAG
ATACCGGCCAAGGGATTCCTGCTCAACAGCTTGAACATATTTTCGAGCCGTTGGTTCAAGCTGGCCATGATTCAGGTCAT
TACCGCCAAGGTGCAGGGCTTGGCTTATCGATAAGTCGACAGCTTATTGAGTTAATGGGCGGTTCTCTTTATGTCAGTAG
TCAGCCTCATGTTGGCACCACGTTCAGCTTCACCCTTCCTTTAGCGACACAGGAAGAAATAGAGCATATGTCTCAATTAG
GACAAAATAGTCACTTCCATATCGCCGAGCCGACTGAGATCAATCCCGAAGAAGAGGAAGTACTTCCTGAGAATCCTGAT
GGACCAGTGTTGCTTGTCGCGGATGATGAGCCAGTGAATTTACGTATCCTAGAGAGCTTTTTAAGACTAGAAGGCTATCA
AGTGAAACTGGCCAAAGATGGCTTAGAAACACTCGATATCATTGAGCATGAAAAACCAGACTTACTATTGCTAGATATTA
TGATGCCTGGAATGAGTGGCTTTGAGGTGTGTGAAACCATTCGTGAACAATACGATCATGCCGCGCTGCCTATCATTATG
CTCACTGCTTTGAATCAATCAGAAGACAGAGTTCGTGGTTTTGAGCTCGGTGCCAATGACTACCTTGCAAAACCGTTCAG
TAAGCCGGAGCTAGCTGCACGTATCGCCGCTCACCTTCAAGCAAGCAAAGCCGAAGAAAGACGCGCCGAAAATCAACTTC
TCAAGTATGAAATCAAGCAACGTGCGTTGGTTGAAGCAAGTTTGTTAGAAACACAAGGGCGTTTGATCGAGCAACTCGAT
AGTGCGCCAGAAGCCATTCTGTGCATCCGAGAAGACCTCAAGGTACAGTTTGCTAACCAAAGTGCAGGACGTATGTTTAA
ACGCAGTGTTGAGCAGCTCAAACGCTCCAATGTTGAAGAGCTTATCGCGCCTAAATTTATTCACTTGTCTCAGGAGCATT
ATTGCGGCGATATCGATATTTTTGTCGATGATGTACGCCAACATATAAATACTGACATTCTCACTTTGCCTGAAGGTTCG
GGATTAAAGAGCATCTACATATTCGAACAAGGGCAGTCTCTCGATCAAACACGCGTTAAGAACCTAGAGACCGCTATTGA
TGCGCTTTCTCGATATGCGATTGAAGGTGATAAGGCGAAACTGCTCGAGCTCAAAGAGCTGGGCGGAGAATTTACTCAAT
TGGCGGATAAAGCCGTCGATGAAGAGAAGTCTCGTCCTGAATTGATGCGCGAGTTATTGGTAGATACCATGACCAATGCG
TTGGAGTATTGGGAAAGTGTTACTGGACAAACCAAGTTTGCCTTTGCTGAACAGAGTGGCTTGTGGCGTGTTTACTTAGA
CCGCAGCACCTTGCAAACGCGCACATTGGATAAATATTTGCGCTTAGAGACGTTACCTAAAACACCTCGTTGGCGCACAG
TACTCAGCTCCGTAGAATACATACTCGACCATTGTCACCGTCAAGGGCCAGAGCGTGACCATATTATTGCTCTGCGCGAC
AAGCTGCAAAAGTTGCTGACCAATTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-425)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.391	100	0.715