Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CO687_RS09700 Genome accession   NZ_CP023511
Coordinates   1965896..1966639 (-) Length   247 a.a.
NCBI ID   WP_012000257.1    Uniprot ID   A8AWD7
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1960896..1971639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS09680 (CO687_09680) thrB 1961040..1961906 (-) 867 WP_061598677.1 homoserine kinase -
  CO687_RS09685 (CO687_09685) - 1961908..1963194 (-) 1287 WP_096755349.1 homoserine dehydrogenase -
  CO687_RS09690 (CO687_09690) - 1963314..1964255 (+) 942 WP_096755350.1 polysaccharide deacetylase family protein -
  CO687_RS09695 (CO687_09695) - 1964278..1965906 (-) 1629 WP_096755351.1 hypothetical protein -
  CO687_RS09700 (CO687_09700) pptA 1965896..1966639 (-) 744 WP_012000257.1 ABC transporter ATP-binding protein Regulator
  CO687_RS09705 (CO687_09705) - 1966755..1968371 (-) 1617 WP_096755352.1 M20/M25/M40 family metallo-hydrolase -
  CO687_RS09710 (CO687_09710) - 1968854..1969567 (-) 714 WP_046165820.1 M57 family metalloprotease -
  CO687_RS09715 (CO687_09715) - 1969705..1970496 (-) 792 WP_060970322.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27673.52 Da        Isoelectric Point: 4.6069

>NTDB_id=207873 CO687_RS09700 WP_012000257.1 1965896..1966639(-) (pptA) [Streptococcus gordonii strain FDAARGOS_371]
MIELKNVTKDYDGHLALRNLNLTIQNGEIVGLIGHNGAGKSTTIKSLVSVINPTSGQIIVDGQELSANRLAIKKKIGYVA
DSPDLFLRLTANEFWELVATSYDMNEADCEERLQYLLETFDFADHRYEVIESFSHGMRQKVFVIGALLSDPDIWVLDEPL
TGLDPQAAFDLKNMMREHADKGNTVIFSTHVLEVAEQLCDRLAILKKGELIFYGTIEELKSQHPEQSLETIYLGLAGRKE
EVVHDAL

Nucleotide


Download         Length: 744 bp        

>NTDB_id=207873 CO687_RS09700 WP_012000257.1 1965896..1966639(-) (pptA) [Streptococcus gordonii strain FDAARGOS_371]
ATGATTGAATTAAAAAATGTAACCAAGGATTATGATGGTCATCTGGCCCTTAGAAATCTAAACTTGACCATTCAAAATGG
TGAAATTGTCGGTCTGATTGGTCATAATGGTGCAGGAAAATCAACGACAATCAAGTCACTAGTCAGTGTCATTAATCCAA
CGAGTGGTCAAATCATTGTTGACGGACAAGAGTTGTCTGCTAACCGACTGGCCATCAAGAAGAAAATTGGTTATGTCGCC
GACTCACCAGACCTCTTTCTTCGTTTAACAGCTAATGAATTCTGGGAGTTGGTAGCCACATCTTACGATATGAATGAAGC
TGACTGTGAGGAACGCTTGCAGTATTTGTTGGAAACTTTTGATTTTGCTGATCATCGATATGAGGTCATCGAATCCTTCT
CACATGGTATGCGTCAAAAAGTATTCGTCATTGGTGCACTACTTTCTGACCCGGATATCTGGGTTTTGGACGAGCCCTTG
ACAGGTTTGGATCCTCAAGCAGCATTTGATCTTAAGAACATGATGCGGGAACATGCAGACAAGGGAAATACTGTTATTTT
TTCAACCCATGTCCTAGAAGTGGCTGAGCAGCTCTGTGATCGATTGGCTATCTTGAAAAAAGGGGAGTTAATTTTTTATG
GAACGATCGAAGAACTCAAGTCCCAACACCCTGAGCAAAGTCTAGAGACTATTTATCTAGGATTGGCTGGACGGAAAGAA
GAGGTGGTCCACGATGCGCTTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AWD7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

37.395

96.356

0.36

Multiple sequence alignment