Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BSR56_RS06805 Genome accession   NZ_CP018260
Coordinates   1388749..1389702 (+) Length   317 a.a.
NCBI ID   WP_075315730.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain XH900     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1383749..1394702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR56_RS06785 (BSR56_06840) - 1384764..1385345 (+) 582 WP_075315732.1 hypothetical protein -
  BSR56_RS06790 (BSR56_06845) - 1385498..1386956 (-) 1459 Protein_1303 DASS family sodium-coupled anion symporter -
  BSR56_RS06795 (BSR56_06850) - 1387218..1387721 (+) 504 Protein_1304 potassium channel family protein -
  BSR56_RS06800 (BSR56_06855) - 1387812..1388429 (+) 618 WP_100833570.1 LysE family translocator -
  BSR56_RS06805 (BSR56_06860) ceuB 1388749..1389702 (+) 954 WP_075315730.1 ABC transporter permease Machinery gene
  BSR56_RS06810 (BSR56_06865) - 1389695..1390651 (+) 957 WP_005081105.1 iron chelate uptake ABC transporter family permease subunit -
  BSR56_RS06815 (BSR56_06870) - 1390642..1391406 (+) 765 WP_100833571.1 ABC transporter ATP-binding protein -
  BSR56_RS06820 (BSR56_06875) - 1391416..1392366 (+) 951 WP_075315728.1 siderophore ABC transporter substrate-binding protein -
  BSR56_RS06825 (BSR56_06880) - 1392412..1393632 (-) 1221 WP_100833572.1 MFS transporter -
  BSR56_RS06830 (BSR56_06885) - 1393863..1394654 (+) 792 WP_213065082.1 DUF4198 domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34529.63 Da        Isoelectric Point: 9.4658

>NTDB_id=207823 BSR56_RS06805 WP_075315730.1 1388749..1389702(+) (ceuB) [Acinetobacter haemolyticus strain XH900]
MIKRRYLLVLLIPLALISLFVGVGDMSLEGLIAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLISIILLPSASIFAKTGFAIIVTLIGAMTFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQLDL
LQNLAGWLQGDFSTILNGQYELIYLSIPVLALIYIFANRFVLAGLGEDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDHIRKTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSVIFLWLLLRRYRYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=207823 BSR56_RS06805 WP_075315730.1 1388749..1389702(+) (ceuB) [Acinetobacter haemolyticus strain XH900]
ATGATTAAACGGCGCTATTTACTGGTTTTACTCATACCTTTGGCATTGATTTCCTTGTTTGTTGGTGTAGGGGATATGAG
TCTTGAAGGATTGATTGCAGGAAATCCACAAGATTGGCAACTCTTTTGGACGAGTCGATTACCACGCCTGATGGCGATTG
TTGTTGCAGGTGCTGGGTTAAGTGTCTGCGGTTTAATTATGCAGTCATTAAGTCGAAATCGCTTTGTTTCACCAACCACA
GCGGGTTTATATGACTGTGCACGGCTGGGCGTTTTAATTTCGATTATTTTGCTTCCAAGTGCTTCTATTTTTGCCAAAAC
TGGATTTGCGATTATTGTCACGCTGATTGGTGCGATGACATTTATGAGTATTCTTGCCACTTTAAAGCACCGAGATACGG
TATTTGTGCCACTCGTTGGGATGATTTTTGGCAGCATTATTTCTGCATTTACGACTTTTATTGCTTTGCAACTTGATTTG
TTGCAGAACTTAGCAGGGTGGTTGCAAGGGGATTTCTCAACCATTTTGAATGGTCAATATGAATTGATTTATTTAAGTAT
TCCCGTTCTTGCATTGATTTATATATTTGCCAATCGTTTTGTCTTGGCAGGCTTGGGTGAAGACTTTGCGACAAATCTAG
GTTTGAACTATAAACAGACACTTTTCTTAGGTCTGCTGCTGGTCTCAGTGATTACTGGTGTGGTGATTGTGACTGTCGGT
GCAATTCCTTTTCTCGGTTTAATTGTGCCAAATCTAGTCAGCCTTTATTTAGGTGATCATATTCGCAAGACGCTTTCACA
TACGGCACTGCTTGGTGCATTGCTGGTCTTACTGTGTGATGTTTTTGGTCGAGTGGTGATTTATCCGTATGAGGTTTCGG
TCAGCCTGATTATGGGGGTGGTTGGTAGTGTGATTTTCCTGTGGTTATTACTCAGGAGATATCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

98.738

0.489

Multiple sequence alignment