Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   BSR55_RS03385 Genome accession   NZ_CP018259
Coordinates   709952..714445 (+) Length   1497 a.a.
NCBI ID   WP_100884509.1    Uniprot ID   -
Organism   Acinetobacter bereziniae strain XH901     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 704952..719445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR55_RS03360 (BSR55_03330) - 705457..706098 (-) 642 WP_051070708.1 hypothetical protein -
  BSR55_RS03365 (BSR55_03335) pilG 706383..706766 (+) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  BSR55_RS03370 (BSR55_03340) - 706787..707155 (+) 369 WP_004827615.1 response regulator -
  BSR55_RS03375 (BSR55_03345) - 707159..707695 (+) 537 WP_100884508.1 chemotaxis protein CheW -
  BSR55_RS03380 (BSR55_03350) - 707738..709807 (+) 2070 WP_004827618.1 methyl-accepting chemotaxis protein -
  BSR55_RS03385 (BSR55_03355) chpA 709952..714445 (+) 4494 WP_100884509.1 Hpt domain-containing protein Regulator
  BSR55_RS03390 (BSR55_03360) - 714454..714921 (+) 468 WP_009586246.1 hypothetical protein -
  BSR55_RS03400 (BSR55_03365) - 715875..717938 (+) 2064 WP_010591326.1 EAL domain-containing protein -
  BSR55_RS03405 (BSR55_03370) fimA 718336..718872 (+) 537 WP_005031083.1 type 1 fimbrial major subunit FimA -
  BSR55_RS03410 (BSR55_03375) - 718926..719423 (+) 498 WP_100884510.1 hypothetical protein -

Sequence


Protein


Download         Length: 1497 a.a.        Molecular weight: 169181.98 Da        Isoelectric Point: 4.4328

>NTDB_id=207787 BSR55_RS03385 WP_100884509.1 709952..714445(+) (chpA) [Acinetobacter bereziniae strain XH901]
MKEILKHLVEHVTLPEDAYLDQDDEILEIFVEELEEIFEQLQASLDQWLNDESKDKELVNVRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRVIAKNLELSTEIQQYVSAVFNVYKFKLYAEFLNKQPHHLDLAPLVYLGQQLQQKQSLEPALADLLSL
AHTLNHENVLTGLEIADSEPLVEHIETVAAMANHENAEEHAVADPIQIDESAAETTPTSDESLISETLTIFVEESEEHLA
TIKDFLHLEQHTPEQYNRLIRALHTLRGSSSMAHIQDVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLHV
LKQTGDQDTQLAQIYQKFNDAWERYDFQHQYQQDHQSQAGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPEYFQQLIHQAQ
ILVDHTDNRASQGIHDFSLALKDGYTQIIAKPDLLNTDYAFEIFSKAHQEFIHLFDTLASGQRVSLSGATQAILDELHDY
VHQEIDVDQIQIAEPSIEPAVQHEAVAVSDINAVETGNHYVLTQINLDKQNIDSAQSQREFDADVLDIFIEEADELLVGM
DHDLNTWSSHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAGPQVIQSIRLIQDDVADRIQ
LIREKSIDYPATHILEVLQHIDQQQFLHDTNVEIAEKAQDEIVLVDESVTPEFDVISADQQQATLEQAEPFVEQIQVDDL
DDAERVAQETFIEEARELIDDGLNILSQWFDQRSNRSLLLQLQRIAHSLKGGAKMVKLEGVADIAYELENAFEQFGQHNF
NSNVYDGLLESAFHWLDAAIFKQSYDNFDGLKLNLNRMQYVDVSAQLPEKLSRTNLIFEQTNNEFVQGDGTEPPSMLGEW
DLSEKTETNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGELESQIIAKHGDL
SARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQ
RLVRQTASAVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDTEQRQKAGKPLTGRIDLNISRQGTDVLVS
FKDDGKGINPAIIRDKAIEKGLIKSDQHLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSLGGQVSVSSELG
HGSTFTIRVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDYQSYKLRYLGEFTANQVTPR
LHGFAHSLPVLLIKGSLGQSVAILVDQLIGSRSQIVVKPIGKQFAAINAIAGATILGDGQVCLILDGQNIARQVQGSSRG
GAEYLQQDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTN
LVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLANIDALLTVK

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=207787 BSR55_RS03385 WP_100884509.1 709952..714445(+) (chpA) [Acinetobacter bereziniae strain XH901]
ATGAAAGAAATATTAAAACATTTAGTTGAACACGTCACTTTACCTGAAGATGCTTATCTTGATCAGGATGATGAGATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGTTGCAAGCTTCTCTTGATCAATGGCTAAATGATGAGTCCA
AAGATAAGGAATTGGTGAATGTACGTCGCTATTTCCATACCCTTAAAGGCTCTGGACGTATGGTGGGGGCAAAGCGTTCA
GGTGAGTTGGCTTGGACTGTTGAAGATACATTAAATCGTGTAATTGCAAAAAACTTGGAATTAAGTACTGAAATTCAACA
ATATGTCAGTGCTGTATTTAATGTGTATAAGTTCAAATTGTATGCTGAGTTTTTAAATAAACAACCACATCATTTAGATT
TGGCACCATTGGTGTATTTGGGGCAACAATTACAGCAAAAACAGAGTTTAGAACCTGCATTGGCGGATCTACTGTCACTT
GCGCATACCCTCAATCATGAGAATGTGCTGACGGGTTTAGAAATTGCTGATAGCGAGCCACTTGTAGAGCATATAGAAAC
AGTAGCAGCTATGGCAAACCACGAAAATGCCGAAGAGCATGCAGTGGCAGACCCGATTCAAATTGATGAATCTGCAGCGG
AAACAACGCCGACTTCGGATGAAAGTTTAATCTCTGAAACCCTGACGATTTTTGTTGAAGAGTCGGAAGAACATTTGGCA
ACGATCAAAGACTTTTTGCATTTAGAGCAACATACACCTGAACAATATAATCGCTTGATTCGGGCATTACATACTTTGCG
CGGAAGTTCTTCTATGGCGCATATTCAGGATGTATTTGAGGCAAGCGGTAAAGTTGAGCATTTGTTTAAGGTGTTGGTCC
AAGAAGATACGGAGTCTTCTAAAAATGAAAACGCCTTATTGACTTATTATGCTGAATTCGTCAGTGATTATTTGCATGTG
CTCAAACAAACCGGTGATCAAGATACGCAATTAGCCCAGATTTATCAAAAATTTAATGATGCTTGGGAACGTTATGATTT
CCAACATCAATATCAACAAGACCATCAGTCACAAGCGGGCTTAGTGACTCAATTGGTCGATTTGGAAATTGATCTATTGT
TGGATGCTGAATTTGAGTTTGATAAACGCGCTCAAGTTGAATATCCAGAATATTTCCAACAACTGATTCACCAGGCTCAG
ATCCTCGTCGATCATACTGACAATCGTGCGTCACAAGGTATTCATGATTTCAGTCTTGCACTCAAAGACGGATATACACA
GATTATTGCCAAGCCTGATTTGCTGAATACGGATTATGCTTTCGAAATATTCTCTAAAGCACATCAAGAATTCATTCATT
TATTTGATACCTTGGCATCTGGTCAGCGTGTCAGTTTGAGTGGTGCAACTCAGGCGATTTTGGATGAGCTTCATGATTAT
GTACATCAAGAAATTGATGTAGATCAGATTCAAATTGCTGAACCAAGCATTGAGCCAGCAGTTCAACATGAGGCAGTAGC
TGTATCTGATATTAACGCTGTTGAGACAGGTAATCATTATGTCTTAACTCAAATTAATCTCGATAAGCAAAATATAGATT
CTGCGCAAAGTCAGCGTGAGTTTGATGCTGACGTTCTTGATATTTTTATTGAGGAGGCCGATGAGTTGTTGGTAGGTATG
GATCATGACCTAAATACATGGTCAAGTCATCCAGATGATACCACTGCACTCAATAATTTAATGCGCTATTTGCACACTTT
AAAAGGTGGCGCAAATATGGTTCAGGCGACGCATATTGGTTTAATTGCTCATGAACTCGAAACAATTTATGAGCGCGTGA
TTAAAGGTCAGCTCAAAGCTGGACCACAAGTTATTCAATCTATTCGTTTGATTCAAGATGATGTCGCAGATCGTATTCAG
TTGATTCGTGAAAAATCTATTGATTATCCTGCAACACACATTCTTGAGGTTTTACAGCATATTGATCAACAGCAATTCTT
GCATGATACGAATGTTGAGATAGCTGAAAAAGCCCAAGATGAGATTGTTTTAGTTGACGAGTCTGTTACTCCAGAATTTG
ATGTTATTTCTGCTGATCAGCAGCAAGCAACGCTTGAACAAGCGGAGCCATTCGTTGAACAGATTCAAGTAGATGACTTG
GATGACGCTGAGCGTGTTGCTCAAGAAACCTTCATTGAGGAAGCTCGTGAGCTGATTGATGATGGGTTAAATATCTTAAG
TCAATGGTTTGATCAACGAAGTAACCGTAGTTTACTACTTCAATTGCAACGTATTGCACACAGCTTAAAAGGCGGTGCAA
AAATGGTGAAATTGGAAGGTGTTGCGGATATTGCTTATGAGCTTGAAAATGCATTTGAACAATTTGGTCAGCACAACTTT
AATTCCAATGTGTATGACGGTTTATTGGAAAGTGCTTTTCACTGGTTAGATGCAGCAATTTTCAAACAGAGTTACGATAA
TTTTGATGGTTTGAAGTTAAATTTAAACCGTATGCAATATGTCGATGTTTCTGCTCAGCTTCCAGAAAAATTATCTCGAA
CCAATTTGATTTTTGAACAGACCAATAATGAGTTTGTTCAAGGAGATGGAACTGAACCACCTTCTATGTTGGGTGAATGG
GATCTTTCTGAGAAAACTGAAACCAATAATGAGATGATTCGTATCTCTGCGGATTTGGTTGAGAAGATGATTGATCTTTC
TGGTGAAAATGCCATTAACCGCTCGCGTATTGAAATGGATTTGGGTCAATTGGGAAATACATTGACCGATATGGAGCTTG
CGATTCAACGATTGGCAGATCAGCTTCGTCGAATGGAAGGCGAGTTGGAAAGTCAAATTATTGCTAAACATGGGGATTTA
AGTGCGCGCTATGCGGACTTTGACCCATTGGAAATGGACCAATATTCATCCTTGAATCAATTGTCTAAATCGCTTGCTGA
ATCTGCATCCGACTTGGTGGACTTTAAAACCACCTTAGCGGAGAAAATTCGTGATACTGAAGGCTTATTATTGCAACAGT
CACGTATTCAAGCTGAAATTCAAGAAAGCCTGATGCGTACCCGACTTGTTCCTTTCTCTCGTTTATTACCACGATTACAG
CGTTTGGTACGCCAAACAGCCTCAGCGGTCAATAAGCCTACCGAACTGTTGGTGAATAATACGGAAGGTGAATTAGATCG
TAATATTTTGGAGAAATTAGTATCTCCATTAGAGCATATGTTGCGTAATGCCATCGACCACGGGATTGAAGATACAGAGC
AGCGACAAAAAGCTGGCAAGCCATTGACTGGTCGAATCGACTTGAATATTAGTCGCCAAGGTACCGATGTTTTGGTGTCC
TTTAAAGATGATGGTAAAGGAATCAATCCTGCAATTATCCGCGATAAAGCTATTGAAAAAGGTTTGATTAAATCAGATCA
GCATTTAGAGCCAGAAGAAATTTTACAATTTATTTTCCATCCTGGTTTTAGTACAGCACAACAAGTCACCCAGATTTCTG
GACGTGGTGTTGGGCTGGATGTGGTTCAAAGTGAAATTAAATCGCTAGGTGGGCAGGTCAGTGTAAGTTCTGAACTGGGT
CATGGCTCTACTTTTACCATCCGTGTACCAACAACAGTTGCTGTGAGTGATGCATTGATGGTGAAAGTCGGTGATCAACA
GTTTGCTGTGCCATTATCGCAAATTGATCGTATTGTGCGAATTTCCCCAGCCGCTCTGGAAGAGTATTTCGAAACTCAAA
ATGACTATTTCGATATAGATTACCAAAGTTATAAATTGCGTTATCTTGGTGAATTTACAGCCAATCAGGTGACGCCACGT
TTACATGGCTTTGCACATTCATTACCTGTGTTATTGATTAAAGGGAGCTTAGGTCAATCTGTCGCGATTCTGGTTGATCA
GTTAATTGGTTCACGTTCTCAAATTGTAGTAAAACCGATTGGGAAGCAATTTGCGGCAATTAATGCGATTGCCGGTGCAA
CGATTCTCGGTGATGGTCAAGTTTGTTTGATTCTTGATGGGCAAAATATTGCGCGACAAGTTCAGGGTTCAAGTCGTGGT
GGTGCAGAATATTTACAACAAGATAAACAACGTCATCGCGATCAACGTCGTCTGATTATGATTGTGGATGACTCGGTGAC
AGTGCGTAAAGTAACGTCACGTTTATTGGAACGTCAAGGTTTTGATGTGATTACGGCTAAAGACGGTGTTGATGCGATTG
AACAACTTGAAAATGTCAAACCAGATCTGATGTTGCTCGATATTGAAATGCCACGAATGGATGGATTTGAGGTGACCAAT
TTGGTTCGCCATCATGAAATTCATCGTGACTTGCCAATTATTATGATTACCTCACGAACAGGTGAAAAACATCGCGAACG
TGCATTCAGCTTGGGTGTGACAAACTATATGGGTAAACCATTCCAAGAGGCTGATTTATTAGCCAATATTGATGCTTTGT
TGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.436

100

0.606


Multiple sequence alignment