Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   CO686_RS04400 Genome accession   NZ_CP023507
Coordinates   881432..881896 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 876432..886896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS04365 (CO686_04365) - 876697..877611 (+) 915 WP_001178523.1 hypothetical protein -
  CO686_RS04370 (CO686_04370) - 877738..878280 (+) 543 WP_002880645.1 ClbS/DfsB family four-helix bundle protein -
  CO686_RS04375 (CO686_04375) - 878567..879070 (+) 504 WP_000504321.1 hypothetical protein -
  CO686_RS04380 (CO686_04380) - 879157..879573 (+) 417 WP_000110629.1 Imm70 family immunity protein -
  CO686_RS04385 (CO686_04385) - 879640..880332 (+) 693 WP_001146405.1 YjjG family noncanonical pyrimidine nucleotidase -
  CO686_RS04390 (CO686_04390) - 880356..880649 (+) 294 WP_000448758.1 hypothetical protein -
  CO686_RS04395 (CO686_04395) - 880769..881422 (+) 654 WP_001164853.1 uracil-DNA glycosylase -
  CO686_RS04400 (CO686_04400) mutX 881432..881896 (+) 465 WP_001135768.1 8-oxo-dGTP diphosphatase Machinery gene
  CO686_RS04405 (CO686_04405) - 881909..883177 (+) 1269 WP_000924511.1 dihydroorotase -
  CO686_RS04410 (CO686_04410) - 883219..884559 (+) 1341 WP_070800463.1 MATE family efflux transporter -
  CO686_RS04415 (CO686_04415) - 884738..885706 (+) 969 WP_096753559.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  CO686_RS04420 (CO686_04420) - 885723..886715 (+) 993 WP_000448708.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=207705 CO686_RS04400 WP_001135768.1 881432..881896(+) (mutX) [Streptococcus oralis strain FDAARGOS_367]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=207705 CO686_RS04400 WP_001135768.1 881432..881896(+) (mutX) [Streptococcus oralis strain FDAARGOS_367]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTCCATCGCAATAAGAAGCCCAACGA
TGTCCATGAAGGCAAATGGATTGGTGTGGGTGGAAAGCTAGAGCGAGGTGAGACTCCACAGGAATGTGCAGCGCGTGAAA
TCCTCGAAGAAACAGGGCTCAAAGCCAAGCCAGTACTTAAAGGTGTTATCACTTTTCCTGAATTTACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTCGAGGGTGACTTGATTGACTGCAATGAGGGGACCTTAGAATGGGTTCC
CTATGATGAAGTCTTAAGCAAGCCAACTTGGGAGGGTGATCACACCTTTGTTGAGTGGCTTTTAGAAGATAAACCTTTCT
TTTCAGCAAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains


Predicted by InterProScan.

(2-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987


Multiple sequence alignment