Detailed information NTG0207687

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BS064_RS11905
• Genome accession: NZ_CP018254
• Coordinates: 2425776..2426477 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain AF-401
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2420776..2431477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS064_RS11875 (BS064_11900)	-	2421082..2421525 (-)	444	WP_001246674.1	SRPBCC family protein	-
BS064_RS11880 (BS064_11905)	tadA	2421595..2422098 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
BS064_RS11885 (BS064_11910)	-	2422105..2423229 (-)	1125	WP_086241960.1	enoyl-CoA hydratase/isomerase family protein	-
BS064_RS11890 (BS064_11915)	ung	2423226..2423939 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
BS064_RS11895 (BS064_11920)	-	2423990..2424586 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
BS064_RS11900 (BS064_11925)	gspK	2424817..2425776 (-)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
BS064_RS11905 (BS064_11930)	xcpW	2425776..2426477 (-)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BS064_RS11910 (BS064_11935)	xcpV	2426477..2426857 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BS064_RS11915 (BS064_11940)	-	2426847..2427401 (-)	555	WP_000841373.1	type II secretion system protein	-
BS064_RS11920 (BS064_11945)	-	2427411..2428019 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BS064_RS11925 (BS064_11950)	-	2428057..2428830 (-)	774	WP_000497301.1	TatD family hydrolase	-
BS064_RS11930 (BS064_11955)	-	2428848..2429189 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
BS064_RS11935 (BS064_11960)	-	2429201..2430181 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
BS064_RS11940 (BS064_11965)	kdsB	2430193..2430954 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=207687 BS064_RS11905 WP_000594590.1 2425776..2426477(-) (xcpW) [Acinetobacter baumannii strain AF-401]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=207687 BS064_RS11905 WP_000594590.1 2425776..2426477(-) (xcpW) [Acinetobacter baumannii strain AF-401]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991