Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   BSZ43_RS09705 Genome accession   NZ_CP018249
Coordinates   1896683..1896886 (+) Length   67 a.a.
NCBI ID   WP_003182112.1    Uniprot ID   A0A5Q3BNZ5
Organism   Bacillus sp. H15-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1891683..1901886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSZ43_RS09665 (BSZ43_09665) - 1891689..1892153 (+) 465 WP_003182064.1 Fur family transcriptional regulator -
  BSZ43_RS09670 (BSZ43_09670) - 1892198..1892865 (+) 668 Protein_1871 GntR family transcriptional regulator -
  BSZ43_RS09675 (BSZ43_09675) - 1892873..1893844 (+) 972 Protein_1872 multidrug resistance efflux transporter family protein -
  BSZ43_RS22375 (BSZ43_09680) - 1893899..1894663 (-) 765 Protein_1873 N-acetylmuramoyl-L-alanine amidase -
  BSZ43_RS09690 (BSZ43_09690) - 1895197..1895679 (-) 483 WP_003182102.1 DMT family transporter -
  BSZ43_RS09695 (BSZ43_09695) - 1895702..1896155 (-) 454 Protein_1875 DMT family transporter -
  BSZ43_RS09705 (BSZ43_09705) rok 1896683..1896886 (+) 204 WP_003182112.1 hypothetical protein Regulator
  BSZ43_RS09710 (BSZ43_09710) - 1897100..1897723 (+) 624 WP_009328434.1 TetR/AcrR family transcriptional regulator -
  BSZ43_RS09715 (BSZ43_09715) - 1897726..1898112 (+) 387 WP_009328433.1 OsmC family protein -
  BSZ43_RS09720 (BSZ43_09720) - 1898145..1899494 (+) 1350 WP_011198001.1 cytosine permease -
  BSZ43_RS09725 (BSZ43_09725) - 1899519..1901624 (+) 2106 WP_011201659.1 hydantoinase/oxoprolinase family protein -

Sequence


Protein


Download         Length: 67 a.a.        Molecular weight: 8116.34 Da        Isoelectric Point: 9.8619

>NTDB_id=207583 BSZ43_RS09705 WP_003182112.1 1896683..1896886(+) (rok) [Bacillus sp. H15-1]
MFNEREALRLRLEQLNNAEIQIIRELQSERKDIYSRLRELDRQKVSSSHHKKTLLELVDETVNLLKK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=207583 BSZ43_RS09705 WP_003182112.1 1896683..1896886(+) (rok) [Bacillus sp. H15-1]
GTGTTCAACGAAAGAGAGGCGCTCCGATTAAGACTGGAGCAACTGAACAATGCCGAGATTCAGATCATACGCGAACTCCA
AAGTGAGCGGAAAGACATTTATTCCAGGCTGCGGGAATTAGATCGTCAAAAAGTTTCTTCATCACATCATAAAAAAACTT
TATTAGAGTTAGTCGATGAAACTGTAAATCTCTTGAAAAAATAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Q3BNZ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

70.213

70.149

0.493


Multiple sequence alignment