Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CO204_RS05540 Genome accession   NZ_CP023477
Coordinates   1057366..1058037 (-) Length   223 a.a.
NCBI ID   WP_002263237.1    Uniprot ID   Q8DUD1
Organism   Streptococcus mutans strain LAR01     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1052366..1063037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS05520 (CO204_05505) - 1053455..1054144 (+) 690 WP_002269136.1 GntR family transcriptional regulator -
  CO204_RS05525 (CO204_05510) citG 1054150..1055040 (+) 891 WP_002265082.1 triphosphoribosyl-dephospho-CoA synthase CitG -
  CO204_RS05530 (CO204_05515) citC 1055216..1056265 (+) 1050 WP_019313226.1 [citrate (pro-3S)-lyase] ligase -
  CO204_RS05535 (CO204_05520) - 1056416..1057369 (-) 954 WP_019313225.1 sensor histidine kinase -
  CO204_RS05540 (CO204_05525) braR 1057366..1058037 (-) 672 WP_002263237.1 response regulator transcription factor Regulator
  CO204_RS05545 (CO204_05530) - 1058082..1060085 (-) 2004 WP_019313224.1 ABC transporter permease -
  CO204_RS05550 (CO204_05535) - 1060087..1060839 (-) 753 WP_002265085.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 25802.90 Da        Isoelectric Point: 5.1691

>NTDB_id=207435 CO204_RS05540 WP_002263237.1 1057366..1058037(-) (braR) [Streptococcus mutans strain LAR01]
MLKQEKIYLVEDDTTIVNLLKNHLGQHYQVKSVDNFRAILQEVKEFKPDLILMDITLPYFNGFYWTTEIRKSMTMPIIFI
SSADEEMNAVMAMNMGGDDFLSKPFSLPILDAKIAAFLRRANEFTKQGHQIEEFELTLDGVFSNLERQETIQLTPTETKI
LSLLIDYKGEVVTKEALLNRLWEGEEFIDQNTLSVNMTRLRKKVLSVSFDKIHTVRGVGYLIK

Nucleotide


Download         Length: 672 bp        

>NTDB_id=207435 CO204_RS05540 WP_002263237.1 1057366..1058037(-) (braR) [Streptococcus mutans strain LAR01]
ATGCTAAAGCAAGAAAAAATTTACTTGGTTGAAGATGATACAACCATTGTCAATCTTTTAAAGAATCATTTGGGACAACA
CTATCAAGTTAAAAGCGTTGATAACTTTAGGGCTATCTTGCAAGAAGTTAAAGAATTTAAACCCGATTTAATTCTGATGG
ATATTACTTTGCCCTATTTCAATGGCTTTTATTGGACTACTGAAATCAGAAAGAGCATGACCATGCCCATTATCTTTATT
TCCAGTGCTGATGAAGAAATGAATGCAGTAATGGCTATGAATATGGGAGGTGATGATTTTTTGAGCAAGCCTTTCTCGCT
GCCTATTTTGGATGCCAAAATCGCTGCTTTCTTGCGCCGTGCTAACGAGTTCACTAAGCAAGGCCATCAAATTGAAGAGT
TTGAATTAACGTTAGATGGTGTATTCTCAAATTTAGAAAGACAAGAGACTATCCAATTGACTCCAACAGAAACGAAAATT
CTTTCCTTACTTATTGATTATAAAGGAGAGGTTGTCACTAAGGAAGCTCTTCTCAACCGACTATGGGAGGGAGAGGAATT
TATTGATCAAAACACGCTTAGTGTCAATATGACACGTCTTCGTAAAAAGGTTCTATCAGTAAGTTTTGATAAGATTCATA
CAGTAAGAGGAGTAGGGTATTTAATTAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

43.498

100

0.435