Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Bateq7PJ16_RS21715 Genome accession   NZ_CP023409
Coordinates   4071846..4072535 (-) Length   229 a.a.
NCBI ID   WP_046161048.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4066846..4077535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS21695 (Bateq7PJ16_4343) yxeA 4067751..4068098 (-) 348 WP_003227084.1 YxeA family protein -
  Bateq7PJ16_RS21700 (Bateq7PJ16_4344) yxdM 4068112..4069980 (-) 1869 WP_114523594.1 ABC transporter permease YxdM -
  Bateq7PJ16_RS21705 (Bateq7PJ16_4345) yxdL 4069955..4070728 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  Bateq7PJ16_RS21710 (Bateq7PJ16_4346) yxdK 4070872..4071849 (-) 978 WP_003227076.1 two-component system sensor histidine kinase YxdK -
  Bateq7PJ16_RS21715 (Bateq7PJ16_4347) braR 4071846..4072535 (-) 690 WP_046161048.1 two-component system response regulator YxdJ Regulator
  Bateq7PJ16_RS21720 (Bateq7PJ16_4348) iolJ 4072643..4073515 (-) 873 WP_046161049.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  Bateq7PJ16_RS21725 (Bateq7PJ16_4349) iolI 4073536..4074372 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  Bateq7PJ16_RS21730 (Bateq7PJ16_4350) iolH 4074458..4075327 (-) 870 WP_021481028.1 sugar phosphate isomerase/epimerase -
  Bateq7PJ16_RS21735 (Bateq7PJ16_4351) iolG 4075347..4076381 (-) 1035 WP_029318586.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26572.29 Da        Isoelectric Point: 4.8564

>NTDB_id=207247 Bateq7PJ16_RS21715 WP_046161048.1 4071846..4072535(-) (braR) [Bacillus subtilis strain 7PJ-16]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDAFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=207247 Bateq7PJ16_RS21715 WP_046161048.1 4071846..4072535(-) (braR) [Bacillus subtilis strain 7PJ-16]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGCCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAAATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment