Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Bateq7PJ16_RS19085 Genome accession   NZ_CP023409
Coordinates   3555835..3556548 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3550835..3561548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS19065 (Bateq7PJ16_3797) ghrB 3550980..3551957 (+) 978 WP_087614731.1 D-glycerate dehydrogenase -
  Bateq7PJ16_RS19070 (Bateq7PJ16_3798) psdB 3551994..3553934 (-) 1941 WP_015483744.1 lantibiotic ABC transporter permease PsdB -
  Bateq7PJ16_RS19075 (Bateq7PJ16_3799) psdA 3553909..3554688 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  Bateq7PJ16_RS19080 (Bateq7PJ16_3800) psdS 3554771..3555841 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  Bateq7PJ16_RS19085 (Bateq7PJ16_3801) braR 3555835..3556548 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  Bateq7PJ16_RS19090 (Bateq7PJ16_3802) - 3556695..3556904 (+) 210 WP_021480676.1 hypothetical protein -
  Bateq7PJ16_RS19095 (Bateq7PJ16_3803) yvcN 3556940..3557704 (-) 765 WP_087614732.1 arylamine N-acetyltransferase -
  Bateq7PJ16_RS19100 (Bateq7PJ16_3804) crh 3557705..3557962 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  Bateq7PJ16_RS19105 (Bateq7PJ16_3805) whiA 3557986..3558936 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  Bateq7PJ16_RS19110 (Bateq7PJ16_3806) mgfK 3558959..3559912 (-) 954 WP_032727102.1 gluconeogenesis morphogenetic factor -
  Bateq7PJ16_RS19115 (Bateq7PJ16_3807) rapZ 3559914..3560801 (-) 888 WP_003228143.1 RNase adapter RapZ -
  Bateq7PJ16_RS19120 (Bateq7PJ16_3808) rppI 3560826..3561302 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=207232 Bateq7PJ16_RS19085 WP_021480675.1 3555835..3556548(-) (braR) [Bacillus subtilis strain 7PJ-16]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=207232 Bateq7PJ16_RS19085 WP_021480675.1 3555835..3556548(-) (braR) [Bacillus subtilis strain 7PJ-16]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43