Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   Bateq7PJ16_RS17440 Genome accession   NZ_CP023409
Coordinates   3223750..3224613 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain 7PJ-16     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3218750..3229613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS17405 (Bateq7PJ16_3458) mrpE 3218916..3219392 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  Bateq7PJ16_RS17410 (Bateq7PJ16_3459) mrpF 3219392..3219676 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  Bateq7PJ16_RS17415 (Bateq7PJ16_3460) mnhG 3219660..3220034 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  Bateq7PJ16_RS17420 (Bateq7PJ16_3461) yuxO 3220075..3220455 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  Bateq7PJ16_RS17425 (Bateq7PJ16_3462) comA 3220474..3221118 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  Bateq7PJ16_RS17430 (Bateq7PJ16_3463) comP 3221199..3223511 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  Bateq7PJ16_RS17435 (Bateq7PJ16_3464) comX 3223527..3223748 (-) 222 WP_014480704.1 competence pheromone ComX -
  Bateq7PJ16_RS17440 (Bateq7PJ16_3465) comQ 3223750..3224613 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  Bateq7PJ16_RS17445 (Bateq7PJ16_3466) degQ 3224798..3224938 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  Bateq7PJ16_RS17450 (Bateq7PJ16_3467) - 3225160..3225285 (+) 126 WP_003228793.1 hypothetical protein -
  Bateq7PJ16_RS17455 (Bateq7PJ16_3468) - 3225400..3225768 (+) 369 WP_046381300.1 hypothetical protein -
  Bateq7PJ16_RS17460 (Bateq7PJ16_3469) pdeH 3225744..3226973 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  Bateq7PJ16_RS17465 (Bateq7PJ16_3470) pncB 3227110..3228582 (-) 1473 WP_159377062.1 nicotinate phosphoribosyltransferase -
  Bateq7PJ16_RS17470 (Bateq7PJ16_3471) pncA 3228598..3229149 (-) 552 WP_038828671.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=207224 Bateq7PJ16_RS17440 WP_014480705.1 3223750..3224613(-) (comQ) [Bacillus subtilis strain 7PJ-16]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=207224 Bateq7PJ16_RS17440 WP_014480705.1 3223750..3224613(-) (comQ) [Bacillus subtilis strain 7PJ-16]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439