Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Bateq7PJ16_RS16320 Genome accession   NZ_CP023409
Coordinates   3038283..3038978 (-) Length   231 a.a.
NCBI ID   WP_124047999.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3033283..3043978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS16300 (Bateq7PJ16_3248) yttA 3033710..3034456 (+) 747 WP_124048000.1 LMBR1 domain-containing protein -
  Bateq7PJ16_RS16305 (Bateq7PJ16_3249) bceB 3034493..3036433 (-) 1941 WP_064670872.1 bacitracin ABC transporter permease BceB -
  Bateq7PJ16_RS16310 (Bateq7PJ16_3250) bceA 3036423..3037184 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  Bateq7PJ16_RS16315 (Bateq7PJ16_3251) bceS 3037286..3038290 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  Bateq7PJ16_RS16320 (Bateq7PJ16_3252) braR 3038283..3038978 (-) 696 WP_124047999.1 two-component response regulator BceR Regulator
  Bateq7PJ16_RS16325 (Bateq7PJ16_3253) ytrF 3039075..3040385 (-) 1311 WP_041851121.1 ABC transporter permease YtrF -
  Bateq7PJ16_RS16330 (Bateq7PJ16_3254) ytrE 3040375..3041070 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  Bateq7PJ16_RS16335 (Bateq7PJ16_3255) - 3041085..3042062 (-) 978 WP_159377012.1 ABC transporter permease -
  Bateq7PJ16_RS16340 (Bateq7PJ16_3256) ytrC 3042092..3043078 (-) 987 WP_159377013.1 ABC transporter permease YtrC -
  Bateq7PJ16_RS16345 (Bateq7PJ16_3257) ytrB 3043072..3043950 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26949.83 Da        Isoelectric Point: 5.3775

>NTDB_id=207221 Bateq7PJ16_RS16320 WP_124047999.1 3038283..3038978(-) (braR) [Bacillus subtilis strain 7PJ-16]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAIDPEQNVVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=207221 Bateq7PJ16_RS16320 WP_124047999.1 3038283..3038978(-) (braR) [Bacillus subtilis strain 7PJ-16]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTATAGACCCGGAGCAAAACGTCGTCAGCAACGACAAAGGATCTGTTGAGCTGACCAAAAACGAGATGTTCATT
CTTAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACACTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40

95.238

0.381

Multiple sequence alignment