Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   Bateq7PJ16_RS04155 Genome accession   NZ_CP023409
Coordinates   802185..803315 (+) Length   376 a.a.
NCBI ID   WP_159376690.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 797185..808315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS04135 (Bateq7PJ16_0788) - 797361..797834 (-) 474 WP_014479086.1 immunity protein YezG family protein -
  Bateq7PJ16_RS04140 (Bateq7PJ16_0789) yeeF 797839..799848 (-) 2010 WP_141949849.1 LXG family T7SS effector deoxyribonuclease toxin YeeF -
  Bateq7PJ16_RS04145 (Bateq7PJ16_0790) - 800028..801035 (+) 1008 WP_159376689.1 hypothetical protein -
  Bateq7PJ16_RS04150 (Bateq7PJ16_0791) - 801163..802020 (+) 858 WP_141949847.1 hypothetical protein -
  Bateq7PJ16_RS04155 (Bateq7PJ16_0792) rapC 802185..803315 (+) 1131 WP_159376690.1 response regulator aspartate phosphatase RapH Regulator
  Bateq7PJ16_RS04160 (Bateq7PJ16_0793) phrH 803305..803478 (+) 174 WP_032726704.1 phosphatase RapH inhibitor PhrH -
  Bateq7PJ16_RS04165 (Bateq7PJ16_0794) yeeI 803638..804357 (+) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  Bateq7PJ16_RS04170 - 804491..804919 (+) 429 WP_121548734.1 spore coat protein -
  Bateq7PJ16_RS04175 (Bateq7PJ16_0796) yezE 805034..805618 (+) 585 WP_129110467.1 TetR/AcrR family transcriptional regulator -
  Bateq7PJ16_RS04180 (Bateq7PJ16_0797) yesE 805697..806140 (+) 444 WP_003233857.1 nuclear transport factor 2 family protein -
  Bateq7PJ16_RS04185 (Bateq7PJ16_0798) yesF 806137..806993 (+) 857 Protein_781 NmrA family NAD(P)-binding protein -
  Bateq7PJ16_RS04190 cotJA 807132..807380 (+) 249 WP_014479094.1 spore coat-associated protein CotJA -
  Bateq7PJ16_RS04195 (Bateq7PJ16_0800) cotJB 807364..807627 (+) 264 WP_014479095.1 spore coat protein CotJB -
  Bateq7PJ16_RS04200 (Bateq7PJ16_0801) cotJC 807642..808211 (+) 570 WP_003233850.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 43999.23 Da        Isoelectric Point: 5.8846

>NTDB_id=207130 Bateq7PJ16_RS04155 WP_159376690.1 802185..803315(+) (rapC) [Bacillus subtilis strain 7PJ-16]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACSRSAATVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=207130 Bateq7PJ16_RS04155 WP_159376690.1 802185..803315(+) (rapC) [Bacillus subtilis strain 7PJ-16]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTTGAAGCCATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAATTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGCAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTTCCCGGAGTGCTGCCACTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.691

100

0.407
  rapF Bacillus subtilis subsp. subtilis str. 168

39.523

100

0.396

Multiple sequence alignment