Detailed information NTG0207116

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: Bateq7PJ16_RS01900
• Genome accession: NZ_CP023409
• Coordinates: 337361..338482 (+)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 7PJ-16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 332361..343482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Bateq7PJ16_RS01875 (Bateq7PJ16_0338)	ycdA	332370..333434 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
Bateq7PJ16_RS01880 (Bateq7PJ16_0339)	-	333435..333587 (-)	153	WP_021481864.1	hypothetical protein	-
Bateq7PJ16_RS01885 (Bateq7PJ16_0340)	ycdB	333761..335179 (+)	1419	WP_129092915.1	YcdB/YcdC domain-containing protein	-
Bateq7PJ16_RS01890 (Bateq7PJ16_0341)	ycdC	335366..336727 (+)	1362	WP_046160119.1	YcdB/YcdC domain-containing protein	-
Bateq7PJ16_RS01895 (Bateq7PJ16_0342)	cwlK	336735..337238 (-)	504	WP_046160022.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
Bateq7PJ16_RS01900 (Bateq7PJ16_0343)	rapF	337361..338482 (+)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
Bateq7PJ16_RS01905 (Bateq7PJ16_0344)	ycdF	338591..339367 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
Bateq7PJ16_RS01910 (Bateq7PJ16_0345)	ycdG	339392..341077 (+)	1686	WP_046160023.1	alpha-glucosidase	-
Bateq7PJ16_RS01915 (Bateq7PJ16_0346)	znuA	341265..342224 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
Bateq7PJ16_RS01920 (Bateq7PJ16_0347)	znuC	342279..342974 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=207116 Bateq7PJ16_RS01900 WP_003234740.1 337361..338482(+) (rapF) [Bacillus subtilis strain 7PJ-16]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=207116 Bateq7PJ16_RS01900 WP_003234740.1 337361..338482(+) (rapF) [Bacillus subtilis strain 7PJ-16]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405