Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BSL056_RS11930 Genome accession   NZ_CP018197
Coordinates   2322169..2322972 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain KCTC 12796BP     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2317169..2327972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSL056_RS11910 (BSL056_11940) - 2319375..2319611 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  BSL056_RS11915 (BSL056_11945) - 2319635..2320384 (-) 750 WP_073206240.1 glycerophosphodiester phosphodiesterase -
  BSL056_RS11920 (BSL056_11950) - 2320612..2321712 (-) 1101 WP_073206243.1 Rap family tetratricopeptide repeat protein -
  BSL056_RS11930 (BSL056_11960) spo0A 2322169..2322972 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  BSL056_RS11935 (BSL056_11965) spoIVB 2323258..2324535 (-) 1278 WP_025092993.1 SpoIVB peptidase -
  BSL056_RS11940 (BSL056_11970) recN 2324736..2326469 (-) 1734 WP_024428012.1 DNA repair protein RecN Machinery gene
  BSL056_RS11945 (BSL056_11975) argR 2326503..2326952 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  BSL056_RS11950 (BSL056_11980) - 2327116..2327970 (-) 855 WP_073206245.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=207032 BSL056_RS11930 WP_024422935.1 2322169..2322972(-) (spo0A) [Bacillus safensis strain KCTC 12796BP]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=207032 BSL056_RS11930 WP_024422935.1 2322169..2322972(-) (spo0A) [Bacillus safensis strain KCTC 12796BP]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTAGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTATAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment