Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CNH35_RS02045 Genome accession   NZ_CP023390
Coordinates   404622..405467 (+) Length   281 a.a.
NCBI ID   WP_001550052.1    Uniprot ID   A0A0H2XGE1
Organism   Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 399622..410467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CNH35_RS02025 (CNH35_02015) - 399888..401729 (-) 1842 WP_000077318.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  CNH35_RS02030 (CNH35_02020) metC 401698..402858 (-) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  CNH35_RS02035 (CNH35_02025) - 402855..403958 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  CNH35_RS02045 (CNH35_02035) spo0J 404622..405467 (+) 846 WP_001550052.1 ParB/RepB/Spo0J family partition protein Regulator
  CNH35_RS02050 (CNH35_02040) - 405624..406505 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  CNH35_RS02055 (CNH35_02045) - 406535..406738 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  CNH35_RS02060 (CNH35_02050) ychF 406750..407847 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  CNH35_RS02065 (CNH35_02055) - 407933..408124 (-) 192 WP_001052483.1 hypothetical protein -
  CNH35_RS02075 (CNH35_02065) rpsF 408368..408664 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  CNH35_RS02080 (CNH35_02070) ssbA 408685..409188 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  CNH35_RS02085 (CNH35_02075) rpsR 409240..409482 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32855.86 Da        Isoelectric Point: 10.0091

>NTDB_id=206930 CNH35_RS02045 WP_001550052.1 404622..405467(+) (spo0J) [Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=206930 CNH35_RS02045 WP_001550052.1 404622..405467(+) (spo0J) [Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XGE1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384