Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSR19_RS10505 Genome accession   NZ_CP018187
Coordinates   2253692..2254459 (+) Length   255 a.a.
NCBI ID   WP_060972962.1    Uniprot ID   A0AB37DCI6
Organism   Streptococcus salivarius strain ICDC2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2248692..2259459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS10490 (BSR19_10640) - 2251006..2251689 (-) 684 WP_060972963.1 YoaK family protein -
  BSR19_RS10495 (BSR19_10645) rlmH 2251706..2252185 (-) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BSR19_RS10500 (BSR19_10650) htrA 2252391..2253626 (+) 1236 WP_002892211.1 S1C family serine protease Regulator
  BSR19_RS10505 (BSR19_10655) spo0J 2253692..2254459 (+) 768 WP_060972962.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29369.77 Da        Isoelectric Point: 9.4081

>NTDB_id=206884 BSR19_RS10505 WP_060972962.1 2253692..2254459(+) (spo0J) [Streptococcus salivarius strain ICDC2]
MQEQLKALSISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=206884 BSR19_RS10505 WP_060972962.1 2253692..2254459(+) (spo0J) [Streptococcus salivarius strain ICDC2]
ATGCAAGAACAACTCAAAGCTTTATCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAGGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58

Multiple sequence alignment