Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BSR19_RS08610 Genome accession   NZ_CP018187
Coordinates   1891766..1892842 (-) Length   358 a.a.
NCBI ID   WP_037598428.1    Uniprot ID   A0AB37DC04
Organism   Streptococcus salivarius strain ICDC2     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1886766..1897842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS08590 (BSR19_08705) - 1887877..1889943 (-) 2067 WP_156246991.1 cation:proton antiporter -
  BSR19_RS08595 (BSR19_08710) - 1889952..1890194 (-) 243 WP_002891697.1 hypothetical protein -
  BSR19_RS08600 (BSR19_08715) - 1890191..1890739 (-) 549 WP_013991103.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  BSR19_RS08605 (BSR19_08720) - 1890736..1891680 (-) 945 WP_148512875.1 TIGR01212 family radical SAM protein -
  BSR19_RS08610 (BSR19_08725) sepM 1891766..1892842 (-) 1077 WP_037598428.1 SepM family pheromone-processing serine protease Regulator
  BSR19_RS08615 (BSR19_08730) coaD 1892820..1893317 (-) 498 WP_073949696.1 pantetheine-phosphate adenylyltransferase -
  BSR19_RS08620 (BSR19_08735) rsmD 1893350..1893898 (-) 549 WP_148512873.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BSR19_RS08625 (BSR19_08740) trxB 1894040..1894993 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  BSR19_RS08630 (BSR19_08745) - 1895026..1895250 (-) 225 WP_002884393.1 DUF4059 family protein -
  BSR19_RS08635 (BSR19_08750) - 1895462..1896205 (-) 744 WP_002891704.1 amino acid ABC transporter ATP-binding protein -
  BSR19_RS08640 (BSR19_08755) - 1896205..1896951 (-) 747 WP_134954496.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39032.72 Da        Isoelectric Point: 9.2472

>NTDB_id=206868 BSR19_RS08610 WP_037598428.1 1891766..1892842(-) (sepM) [Streptococcus salivarius strain ICDC2]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFSLFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYTTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=206868 BSR19_RS08610 WP_037598428.1 1891766..1892842(-) (sepM) [Streptococcus salivarius strain ICDC2]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTCTTTTCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGGGCTTTTGATACTAAGG
AAGTTTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCAACT
TTGGCCCTTATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCGACTGGAAATTACTCTGA
CGAAGATTTCATGCGTATCAACCAGTTTTACATGGAGACTTCACAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTA
ATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGCACTATTGAAAAGGATGGGGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGATATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623


Multiple sequence alignment