Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   BSR19_RS02195 Genome accession   NZ_CP018187
Coordinates   414410..414853 (+) Length   147 a.a.
NCBI ID   WP_156246390.1    Uniprot ID   A0AB37D8I1
Organism   Streptococcus salivarius strain ICDC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 409410..419853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS02180 (BSR19_02180) gdhA 410474..411826 (+) 1353 WP_037597452.1 NADP-specific glutamate dehydrogenase -
  BSR19_RS02185 (BSR19_02185) - 412113..413654 (+) 1542 WP_156246388.1 hypothetical protein -
  BSR19_RS02190 (BSR19_02190) - 413811..414221 (+) 411 WP_156246389.1 peptide deformylase -
  BSR19_RS02195 (BSR19_02195) rcrR 414410..414853 (+) 444 WP_156246390.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  BSR19_RS02200 (BSR19_02200) - 414857..416662 (+) 1806 Protein_382 ABC transporter ATP-binding protein -
  BSR19_RS02205 (BSR19_02205) - 416652..418423 (+) 1772 Protein_383 ABC transporter ATP-binding protein -
  BSR19_RS11555 - 418780..419091 (+) 312 WP_231605974.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17149.64 Da        Isoelectric Point: 9.7871

>NTDB_id=206836 BSR19_RS02195 WP_156246390.1 414410..414853(+) (rcrR) [Streptococcus salivarius strain ICDC2]
MHGKDPFNEIKKFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDVEKRLSISKSVASNLVKRMERNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHEQLLEGISKEDAEIAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=206836 BSR19_RS02195 WP_156246390.1 414410..414853(+) (rcrR) [Streptococcus salivarius strain ICDC2]
ATGCATGGAAAAGATCCTTTTAATGAAATCAAAAAATTCATCAATACCATGGAATCTAGAGTGCAAGAGCTAGGCAAAGC
TTACGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTCAGGTACTTGTTTGAGAACCAAGATAAAGAAATCTTTA
TCAAAGATGTCGAGAAAAGGCTATCTATATCTAAATCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAGAAACGGTTTC
GTTGAATTGGTGACATCGGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTGGGTAAAAAGAAGGCCCAAGA
TGTTGGACATTTCCGAGAGGCTATCCATGAACAGTTATTAGAAGGCATTTCGAAAGAGGATGCTGAAATAGCTTTTCGGG
TCTTTCACCAAATTCGTAAGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

55.319

95.918

0.531

Multiple sequence alignment