Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   BSR14_RS08430 Genome accession   NZ_CP018186
Coordinates   1834615..1835691 (-) Length   358 a.a.
NCBI ID   WP_045769055.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ICDC1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1829615..1840691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR14_RS08405 (BSR14_08485) - 1829760..1830542 (+) 783 WP_045769056.1 ABC transporter ATP-binding protein -
  BSR14_RS08410 (BSR14_08490) - 1830726..1832792 (-) 2067 WP_004183325.1 cation:proton antiporter -
  BSR14_RS08415 (BSR14_08495) - 1832801..1833043 (-) 243 WP_014634967.1 hypothetical protein -
  BSR14_RS08420 (BSR14_08500) - 1833040..1833588 (-) 549 WP_045772008.1 class I SAM-dependent methyltransferase -
  BSR14_RS08425 (BSR14_08505) - 1833585..1834529 (-) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  BSR14_RS08430 (BSR14_08510) sepM 1834615..1835691 (-) 1077 WP_045769055.1 SepM family pheromone-processing serine protease Regulator
  BSR14_RS08435 (BSR14_08515) coaD 1835669..1836166 (-) 498 WP_045772009.1 pantetheine-phosphate adenylyltransferase -
  BSR14_RS08440 (BSR14_08520) rsmD 1836199..1836738 (-) 540 WP_045772010.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  BSR14_RS08445 (BSR14_08525) trxB 1836888..1837841 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  BSR14_RS08450 (BSR14_08530) - 1837874..1838098 (-) 225 WP_002884393.1 DUF4059 family protein -
  BSR14_RS08455 (BSR14_08535) - 1838310..1839053 (-) 744 WP_156209932.1 amino acid ABC transporter ATP-binding protein -
  BSR14_RS08460 (BSR14_08540) - 1839053..1839799 (-) 747 WP_118058287.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38978.63 Da        Isoelectric Point: 9.2472

>NTDB_id=206802 BSR14_RS08430 WP_045769055.1 1834615..1835691(-) (sepM) [Streptococcus salivarius strain ICDC1]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSSENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=206802 BSR14_RS08430 WP_045769055.1 1834615..1835691(-) (sepM) [Streptococcus salivarius strain ICDC1]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCCCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGGAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTACTTCAGGTGGCTGACGATTCTAGCTTTAAGGGTGTTCTTAAT
ATTGCCGATACGGTGACAGCTGTTAATGGCAAGACCTTTGATAATTCTGCTGACTTGATTAAATACGTTCAGGGACTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAGAGTTCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTTGGCGGCCCAAGTGCGGGTCTTATGTTTACCCTAGCTATTTACGATCAGGTGTCTGGTCAAGATCTTAAGGCTGG
CCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTCGTACCTAATAATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCAGAT
GCCAAAACCAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATTGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623


Multiple sequence alignment