Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SMA_1659 Genome accession   HE613569
Coordinates   1614460..1615260 (-) Length   266 a.a.
NCBI ID   CCF02950.1    Uniprot ID   -
Organism   Streptococcus macedonicus ACA-DC 198     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1609460..1620260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMA_1654 cutC 1610474..1611112 (+) 639 CCF02945.1 Cytoplasmic copper homeostasis protein CutC -
  SMA_1655 - 1611243..1611584 (-) 342 CCF02946.1 Nitrogen regulatory protein P-II -
  SMA_1656 nrgA 1611641..1612876 (-) 1236 CCF02947.1 Ammonium transporter -
  SMA_1657 rsmI 1613274..1614140 (-) 867 CCF02948.1 rRNA small subunit methyltransferase I -
  SMA_1658 - 1614147..1614467 (-) 321 CCF02949.1 DNA replication intiation control protein YabA -
  SMA_1659 yaaT 1614460..1615260 (-) 801 CCF02950.1 Signal peptidase-like protein Regulator
  SMA_1660 holB 1615257..1616132 (-) 876 CCF02951.1 DNA polymerase III delta prime subunit -
  SMA_1661 tmk 1616143..1616778 (-) 636 CCF02952.1 Thymidylate kinase -
  SMA_1662 acuB 1616965..1617624 (-) 660 CCF02953.1 Acetoin utilization AcuB protein -
  SMA_1663 livF 1617798..1618508 (-) 711 CCF02954.1 Branched-chain amino acid transport ATP-binding protein LivF -
  SMA_1664 livG 1618508..1619272 (-) 765 CCF02955.1 Branched-chain amino acid transport ATP-binding protein LivG -
  SMA_1665 livM 1619272..1620225 (-) 954 CCF02956.1 Branched-chain amino acid transport system permease protein LivM -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29690.43 Da        Isoelectric Point: 7.5446

>NTDB_id=20676 SMA_1659 CCF02950.1 1614460..1615260(-) (yaaT) [Streptococcus macedonicus ACA-DC 198]
MTEVLSVKYEETGSIVYVLPNKKYKLGDYVVVKNKKGCRLAQVVTSNEVIDEVKLPAEMDSVTRLANEKDKQAFQENIDL
AKHSFSTVNELILANDLKMKVIDIIFPLERSYVLITFSAEERVDFRRLLRDLAGHFKTRIELRQINSREEAKVYGGVGPC
GRALCCSSFLGEFPPVSIKMVKNQGMSLSTGKTAGICGRLMCCLSFEDDFYKTSKEKFPDVGTEIETADGLGVIAGIGVF
SDTVKVRLPEKHTLLTYALEEVKVRG

Nucleotide


Download         Length: 801 bp        

>NTDB_id=20676 SMA_1659 CCF02950.1 1614460..1615260(-) (yaaT) [Streptococcus macedonicus ACA-DC 198]
ATGACAGAAGTATTGAGCGTAAAATACGAAGAAACAGGCAGTATTGTCTATGTTTTACCAAATAAAAAATATAAACTCGG
CGATTACGTCGTCGTCAAAAATAAAAAAGGGTGTCGTTTGGCGCAAGTTGTCACTAGTAACGAAGTCATCGATGAGGTCA
AATTACCTGCTGAGATGGATTCTGTGACGCGTCTTGCCAACGAAAAAGATAAACAAGCATTCCAAGAAAATATTGACTTA
GCGAAGCATTCGTTTTCAACGGTTAATGAGCTGATTTTAGCCAATGACCTAAAAATGAAAGTGATTGATATTATTTTCCC
ATTGGAAAGAAGCTATGTGCTTATCACGTTTTCAGCAGAAGAACGTGTTGATTTTCGTCGATTGCTACGTGACTTAGCAG
GTCATTTCAAAACAAGAATTGAACTTCGCCAAATCAATAGTCGCGAAGAAGCTAAGGTTTATGGTGGTGTTGGACCATGT
GGTCGTGCCCTTTGCTGCTCAAGCTTCTTGGGAGAATTTCCACCTGTATCTATTAAAATGGTCAAAAATCAAGGAATGTC
ACTCAGCACAGGAAAAACAGCAGGTATCTGTGGACGTTTGATGTGTTGTTTGAGTTTTGAAGATGACTTTTATAAAACCT
CTAAGGAGAAATTCCCTGATGTGGGAACGGAGATTGAAACAGCTGATGGCTTGGGAGTTATTGCGGGGATTGGTGTGTTT
TCTGATACCGTCAAAGTTCGTTTACCGGAAAAACACACGCTTTTAACCTATGCTTTAGAGGAGGTCAAAGTACGTGGATA
A

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.322

100

0.425

Multiple sequence alignment