Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BSR08_RS09510 | Genome accession | NZ_CP018184 |
| Coordinates | 1730806..1731216 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain KH2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1726173..1754102 | 1730806..1731216 | within | 0 |
Gene organization within MGE regions
Location: 1726173..1754102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR08_RS09485 (BSR08_09635) | yqeF | 1726340..1727071 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| BSR08_RS09490 (BSR08_09640) | cwlH | 1727323..1728075 (-) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| BSR08_RS09495 (BSR08_09645) | yqeD | 1728262..1728888 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| BSR08_RS09500 (BSR08_09650) | gnd | 1728907..1729800 (-) | 894 | WP_014480320.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| BSR08_RS09505 (BSR08_09655) | yqeB | 1730051..1730773 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| BSR08_RS09510 (BSR08_09660) | nucA/comI | 1730806..1731216 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| BSR08_RS09515 (BSR08_09665) | sigK | 1731412..1732140 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| BSR08_RS22790 (BSR08_09670) | - | 1732140..1732238 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| BSR08_RS23355 | - | 1732235..1732447 (-) | 213 | Protein_1881 | recombinase family protein | - |
| BSR08_RS09525 (BSR08_09680) | fumC | 1732666..1734054 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| BSR08_RS09530 (BSR08_09685) | - | 1734221..1735111 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
| BSR08_RS09535 (BSR08_09690) | - | 1736053..1736448 (+) | 396 | WP_014480327.1 | VOC family protein | - |
| BSR08_RS09545 (BSR08_09700) | - | 1737188..1738315 (-) | 1128 | WP_014480328.1 | Rap family tetratricopeptide repeat protein | - |
| BSR08_RS23605 (BSR08_09705) | - | 1738497..1740423 (+) | 1927 | Protein_1886 | T7SS effector LXG polymorphic toxin | - |
| BSR08_RS09555 (BSR08_09710) | - | 1740437..1740724 (+) | 288 | WP_014480331.1 | hypothetical protein | - |
| BSR08_RS09560 (BSR08_09715) | - | 1741127..1741567 (+) | 441 | WP_014480332.1 | SMI1/KNR4 family protein | - |
| BSR08_RS09565 (BSR08_09720) | - | 1741666..1742118 (+) | 453 | WP_014480333.1 | SMI1/KNR4 family protein | - |
| BSR08_RS09570 (BSR08_09725) | cdiI | 1742215..1742574 (+) | 360 | WP_014480334.1 | ribonuclease toxin immunity protein CdiI | - |
| BSR08_RS09575 (BSR08_09730) | - | 1742679..1743158 (+) | 480 | WP_224588637.1 | hypothetical protein | - |
| BSR08_RS22800 | - | 1743466..1743669 (-) | 204 | WP_123772462.1 | hypothetical protein | - |
| BSR08_RS09580 (BSR08_09735) | - | 1743758..1743991 (+) | 234 | WP_224588641.1 | hypothetical protein | - |
| BSR08_RS09585 (BSR08_09740) | atxG | 1744259..1744836 (+) | 578 | Protein_1894 | suppressor of fused domain protein | - |
| BSR08_RS09590 (BSR08_09745) | - | 1744946..1745236 (+) | 291 | WP_014480337.1 | contact-dependent growth inhibition system immunity protein | - |
| BSR08_RS09600 (BSR08_09755) | istA | 1746077..1747624 (+) | 1548 | WP_014480339.1 | IS21 family transposase | - |
| BSR08_RS09605 (BSR08_09760) | istB | 1747621..1748379 (+) | 759 | WP_014479891.1 | IS21-like element helper ATPase IstB | - |
| BSR08_RS23375 | - | 1748697..1748794 (-) | 98 | Protein_1898 | N-acetylmuramoyl-L-alanine amidase | - |
| BSR08_RS09615 (BSR08_09770) | - | 1748972..1749058 (+) | 87 | WP_072592549.1 | putative holin-like toxin | - |
| BSR08_RS23700 (BSR08_09775) | - | 1749345..1749781 (-) | 437 | Protein_1900 | phage tail tube protein | - |
| BSR08_RS23080 (BSR08_09780) | terS | 1749779..1750344 (-) | 566 | Protein_1901 | phage terminase small subunit | - |
| BSR08_RS22810 | - | 1750471..1750776 (+) | 306 | WP_123772463.1 | hypothetical protein | - |
| BSR08_RS23390 | - | 1750949..1751014 (-) | 66 | Protein_1903 | hypothetical protein | - |
| BSR08_RS09630 (BSR08_09785) | - | 1751169..1751648 (-) | 480 | WP_014480344.1 | hypothetical protein | - |
| BSR08_RS09635 (BSR08_09790) | - | 1752265..1752531 (+) | 267 | WP_033881358.1 | hypothetical protein | - |
| BSR08_RS09640 (BSR08_09795) | - | 1752670..1752822 (-) | 153 | WP_049832653.1 | XtrA/YqaO family protein | - |
| BSR08_RS09645 (BSR08_09800) | - | 1752905..1753027 (-) | 123 | Protein_1907 | RusA family crossover junction endodeoxyribonuclease | - |
| BSR08_RS09650 (BSR08_09805) | - | 1752990..1753238 (-) | 249 | Protein_1908 | hypothetical protein | - |
| BSR08_RS23395 | - | 1753383..1753613 (-) | 231 | WP_224588644.1 | hypothetical protein | - |
| BSR08_RS09660 (BSR08_09815) | - | 1753922..1754102 (-) | 181 | Protein_1910 | hypothetical protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=206710 BSR08_RS09510 WP_009967785.1 1730806..1731216(-) (nucA/comI) [Bacillus subtilis strain KH2]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=206710 BSR08_RS09510 WP_009967785.1 1730806..1731216(-) (nucA/comI) [Bacillus subtilis strain KH2]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |