Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BSR08_RS04020 Genome accession   NZ_CP018184
Coordinates   745995..746459 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain KH2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 740995..751459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS03995 (BSR08_04050) - 741581..742705 (+) 1125 WP_014478926.1 IS4-like element IS4Bsu1 family transposase -
  BSR08_RS04000 (BSR08_04055) - 742818..743295 (+) 478 Protein_782 HAMP domain-containing sensor histidine kinase -
  BSR08_RS04005 (BSR08_04060) dapX 743292..744473 (-) 1182 WP_014479654.1 aminotransferase A -
  BSR08_RS04010 (BSR08_04065) - 744675..744836 (-) 162 WP_003245246.1 hypothetical protein -
  BSR08_RS04015 (BSR08_04070) cheV 745040..745951 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  BSR08_RS04020 (BSR08_04075) kre 745995..746459 (-) 465 WP_003232406.1 YkyB family protein Regulator
  BSR08_RS04025 (BSR08_04080) ykuC 746585..747877 (-) 1293 WP_014479656.1 MFS transporter -
  BSR08_RS04030 (BSR08_04085) ltdD 747953..748447 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  BSR08_RS04035 (BSR08_04090) ppeE 748504..749364 (-) 861 WP_003232400.1 metallophosphoesterase -
  BSR08_RS04040 (BSR08_04095) fadH 749507..750271 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=206687 BSR08_RS04020 WP_003232406.1 745995..746459(-) (kre) [Bacillus subtilis strain KH2]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=206687 BSR08_RS04020 WP_003232406.1 745995..746459(-) (kre) [Bacillus subtilis strain KH2]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment