Detailed information NTG0206510

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CNQ52_RS24220
• Genome accession: NZ_CP023366
• Coordinates: 4765539..4766564 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 1428
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4760539..4771564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNQ52_RS24210 (CNQ52_24210)	rpmE	4762770..4762982 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
CNQ52_RS24215 (CNQ52_24215)	priA	4763185..4765383 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
CNQ52_RS24220 (CNQ52_24220)	cytR	4765539..4766564 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CNQ52_RS24225 (CNQ52_24225)	ftsN	4766656..4767615 (+)	960	WP_000068834.1	cell division protein FtsN	-
CNQ52_RS24230 (CNQ52_24230)	hslV	4767708..4768238 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
CNQ52_RS24235 (CNQ52_24235)	hslU	4768248..4769579 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
CNQ52_RS24240 (CNQ52_24240)	menA	4769646..4770572 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CNQ52_RS24245 (CNQ52_24245)	rraA	4770665..4771150 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CNQ52_RS24250 (CNQ52_24250)	zapB	4771235..4771480 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=206510 CNQ52_RS24220 WP_000644904.1 4765539..4766564(+) (cytR) [Escherichia coli strain 1428]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=206510 CNQ52_RS24220 WP_000644904.1 4765539..4766564(+) (cytR) [Escherichia coli strain 1428]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628