Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | BOC72_RS09545 | Genome accession | NZ_CP018138 |
| Coordinates | 1735342..1736508 (-) | Length | 388 a.a. |
| NCBI ID | WP_001085462.1 | Uniprot ID | A0A0B7KZM2 |
| Organism | Streptococcus pneumoniae strain SP64 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1728420..1772282 | 1735342..1736508 | within | 0 |
Gene organization within MGE regions
Location: 1728420..1772282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BOC72_RS09495 (BOC72_01780) | - | 1728717..1729268 (-) | 552 | WP_001111247.1 | hypothetical protein | - |
| BOC72_RS09500 (BOC72_01781) | - | 1729258..1729455 (-) | 198 | WP_000890144.1 | hypothetical protein | - |
| BOC72_RS09505 (BOC72_01782) | - | 1729459..1730253 (-) | 795 | WP_001101215.1 | hypothetical protein | - |
| BOC72_RS09510 (BOC72_01783) | - | 1730661..1731086 (-) | 426 | WP_000204068.1 | hypothetical protein | - |
| BOC72_RS09515 (BOC72_01784) | - | 1731215..1731574 (-) | 360 | WP_000749821.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BOC72_RS09520 (BOC72_01785) | - | 1731620..1731826 (-) | 207 | WP_000366087.1 | hypothetical protein | - |
| BOC72_RS09525 | - | 1731813..1731974 (-) | 162 | WP_000289348.1 | helix-turn-helix domain-containing protein | - |
| BOC72_RS09530 (BOC72_01786) | lytA | 1732333..1733289 (-) | 957 | WP_000405240.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| BOC72_RS09535 (BOC72_01787) | - | 1733665..1735035 (-) | 1371 | WP_001036271.1 | MATE family efflux transporter | - |
| BOC72_RS09545 (BOC72_01788) | recA | 1735342..1736508 (-) | 1167 | WP_001085462.1 | recombinase RecA | Machinery gene |
| BOC72_RS09550 (BOC72_01789) | cinA | 1736563..1737819 (-) | 1257 | WP_000642704.1 | competence/damage-inducible protein A | Machinery gene |
| BOC72_RS09555 (BOC72_01790) | brpA | 1737904..1738920 (-) | 1017 | WP_000239278.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| BOC72_RS09560 (BOC72_01791) | - | 1738928..1739446 (-) | 519 | WP_000455536.1 | GNAT family N-acetyltransferase | - |
| BOC72_RS09565 (BOC72_01792) | tsaE | 1739436..1739879 (-) | 444 | WP_000288230.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| BOC72_RS09570 (BOC72_01793) | comM | 1739965..1740585 (-) | 621 | WP_000839909.1 | hypothetical protein | Regulator |
| BOC72_RS09575 (BOC72_01794) | - | 1740891..1741754 (-) | 864 | WP_001093609.1 | helix-turn-helix domain-containing protein | - |
| BOC72_RS12575 (BOC72_01795) | - | 1741947..1742117 (+) | 171 | WP_001227863.1 | PhrA family quorum-sensing system peptide | - |
| BOC72_RS09585 (BOC72_01796) | - | 1742519..1742833 (+) | 315 | WP_000420682.1 | YdcP family protein | - |
| BOC72_RS09590 (BOC72_01797) | - | 1742849..1743235 (+) | 387 | WP_000985015.1 | YdcP family protein | - |
| BOC72_RS09595 (BOC72_01798) | - | 1743264..1744649 (+) | 1386 | WP_000813494.1 | FtsK/SpoIIIE domain-containing protein | - |
| BOC72_RS09600 | - | 1744652..1744804 (+) | 153 | WP_000879507.1 | hypothetical protein | - |
| BOC72_RS09605 (BOC72_01799) | mobT | 1744827..1746089 (+) | 1263 | WP_001814870.1 | MobT family relaxase | - |
| BOC72_RS09610 | - | 1746034..1746246 (+) | 213 | WP_029645760.1 | peptide-binding protein | - |
| BOC72_RS09615 | - | 1746295..1746378 (+) | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| BOC72_RS09620 (BOC72_01800) | erm(B) | 1746503..1747240 (+) | 738 | WP_001038795.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| BOC72_RS09625 (BOC72_01802) | - | 1747497..1748744 (-) | 1248 | WP_000019067.1 | ISL3 family transposase | - |
| BOC72_RS09630 (BOC72_01803) | - | 1748924..1749145 (+) | 222 | WP_001009056.1 | hypothetical protein | - |
| BOC72_RS09635 (BOC72_01804) | - | 1749262..1749759 (+) | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| BOC72_RS09640 (BOC72_01805) | - | 1749848..1750240 (+) | 393 | WP_000723888.1 | conjugal transfer protein | - |
| BOC72_RS09645 (BOC72_01806) | - | 1750224..1752671 (+) | 2448 | WP_000331160.1 | ATP-binding protein | - |
| BOC72_RS09650 (BOC72_01807) | - | 1752674..1754851 (+) | 2178 | WP_001814875.1 | CD3337/EF1877 family mobilome membrane protein | - |
| BOC72_RS09655 (BOC72_01808) | - | 1754848..1755849 (+) | 1002 | WP_000769868.1 | lysozyme family protein | - |
| BOC72_RS09660 (BOC72_01809) | - | 1755846..1756778 (+) | 933 | WP_001224318.1 | conjugal transfer protein | - |
| BOC72_RS09665 (BOC72_01810) | tet(M) | 1757097..1759016 (+) | 1920 | WP_000691729.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| BOC72_RS09675 (BOC72_01811) | - | 1759380..1759625 (+) | 246 | WP_001813542.1 | hypothetical protein | - |
| BOC72_RS09680 (BOC72_01812) | - | 1759622..1759957 (+) | 336 | WP_000806926.1 | hypothetical protein | - |
| BOC72_RS09685 (BOC72_01813) | - | 1759970..1760338 (+) | 369 | WP_000567222.1 | hypothetical protein | - |
| BOC72_RS09690 (BOC72_01814) | - | 1760325..1760624 (+) | 300 | WP_001072467.1 | DUF5960 family protein | - |
| BOC72_RS09695 (BOC72_01815) | msr(D) | 1760742..1762205 (-) | 1464 | WP_000420313.1 | ABC-F type ribosomal protection protein Msr(D) | - |
| BOC72_RS09700 (BOC72_01816) | mef(A) | 1762325..1763542 (-) | 1218 | WP_000417519.1 | macrolide efflux MFS transporter Mef(A) | - |
| BOC72_RS09705 (BOC72_01817) | - | 1763928..1764098 (-) | 171 | WP_000873143.1 | hypothetical protein | - |
| BOC72_RS09710 | - | 1764620..1764811 (+) | 192 | WP_001860868.1 | cysteine-rich KTR domain-containing protein | - |
| BOC72_RS09715 (BOC72_01818) | - | 1764871..1765224 (-) | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| BOC72_RS09720 (BOC72_01819) | - | 1765729..1766151 (+) | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| BOC72_RS09725 (BOC72_01820) | - | 1766148..1766378 (+) | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| BOC72_RS12470 | - | 1766604..1766855 (-) | 252 | WP_001845478.1 | hypothetical protein | - |
| BOC72_RS09735 (BOC72_01821) | - | 1766839..1767042 (+) | 204 | WP_000814511.1 | excisionase | - |
| BOC72_RS09740 (BOC72_01822) | - | 1767124..1768341 (+) | 1218 | WP_001291561.1 | tyrosine-type recombinase/integrase | - |
| BOC72_RS09750 (BOC72_01823) | - | 1769232..1771247 (+) | 2016 | WP_000732395.1 | DUF1430 domain-containing protein | - |
| BOC72_RS09755 (BOC72_01824) | - | 1771249..1771881 (+) | 633 | WP_000571425.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 41949.78 Da Isoelectric Point: 4.8403
>NTDB_id=206232 BOC72_RS09545 WP_001085462.1 1735342..1736508(-) (recA) [Streptococcus pneumoniae strain SP64]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE
Nucleotide
Download Length: 1167 bp
>NTDB_id=206232 BOC72_RS09545 WP_001085462.1 1735342..1736508(-) (recA) [Streptococcus pneumoniae strain SP64]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTCCGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTCCGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.