Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BMJ37_RS07340 Genome accession   NZ_CP018133
Coordinates   1409755..1410219 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain ATR2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1404755..1415219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMJ37_RS07315 (BMJ37_07080) - 1405236..1407056 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  BMJ37_RS07320 (BMJ37_07085) - 1407037..1408250 (-) 1214 Protein_1395 aminotransferase A -
  BMJ37_RS20015 - 1408451..1408612 (-) 162 WP_099721949.1 hypothetical protein -
  BMJ37_RS07335 (BMJ37_07090) cheV 1408801..1409712 (+) 912 WP_029973673.1 chemotaxis protein CheV -
  BMJ37_RS07340 (BMJ37_07095) kre 1409755..1410219 (-) 465 WP_003154622.1 YkyB family protein Regulator
  BMJ37_RS07345 (BMJ37_07100) - 1410342..1411634 (-) 1293 WP_029973674.1 MFS transporter -
  BMJ37_RS07350 (BMJ37_07105) - 1411710..1412204 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  BMJ37_RS07355 (BMJ37_07110) - 1412279..1413142 (-) 864 WP_021493757.1 metallophosphoesterase -
  BMJ37_RS07360 (BMJ37_07115) fadH 1413286..1414050 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BMJ37_RS07365 (BMJ37_07120) - 1414164..1414712 (+) 549 WP_029973676.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=205972 BMJ37_RS07340 WP_003154622.1 1409755..1410219(-) (kre) [Bacillus velezensis strain ATR2]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=205972 BMJ37_RS07340 WP_003154622.1 1409755..1410219(-) (kre) [Bacillus velezensis strain ATR2]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment