Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | B8B76_RS02385 | Genome accession | NZ_CP023316 |
| Coordinates | 513581..513946 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PPF-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 508581..518946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B8B76_RS02355 (B8B76_02355) | pyrR | 509203..509715 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| B8B76_RS02360 (B8B76_02360) | ruvX | 509827..510261 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| B8B76_RS02365 (B8B76_02365) | - | 510261..510830 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| B8B76_RS02370 (B8B76_02370) | - | 510879..511772 (-) | 894 | WP_009315060.1 | energy transducer TonB | - |
| B8B76_RS02375 (B8B76_02375) | gshB | 511919..512872 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| B8B76_RS02380 (B8B76_02380) | pilG | 513127..513534 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| B8B76_RS02385 (B8B76_02385) | pilH | 513581..513946 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| B8B76_RS02390 (B8B76_02390) | - | 513997..514533 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| B8B76_RS02395 (B8B76_02395) | pilJ | 514618..516666 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| B8B76_RS02400 (B8B76_02400) | pilK | 516727..517602 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=205854 B8B76_RS02385 WP_003084587.1 513581..513946(+) (pilH) [Pseudomonas aeruginosa strain PPF-1]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=205854 B8B76_RS02385 WP_003084587.1 513581..513946(+) (pilH) [Pseudomonas aeruginosa strain PPF-1]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |