Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CLD04_RS21465 Genome accession   NZ_CP023257
Coordinates   4062580..4063428 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain TLO3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4057580..4068428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLD04_RS21445 (CLD04_21445) yyaE 4058089..4060092 (-) 2004 WP_014481509.1 molybdopterin-dependent oxidoreductase -
  CLD04_RS21450 (CLD04_21450) yyzM 4060143..4060349 (-) 207 WP_003226838.1 DUF951 family protein -
  CLD04_RS21455 (CLD04_21455) - 4060443..4061459 (-) 1017 WP_010886647.1 membrane protein -
  CLD04_RS21460 (CLD04_21460) yyaC 4061924..4062541 (+) 618 WP_041351260.1 spore protease YyaC -
  CLD04_RS21465 (CLD04_21465) spo0J 4062580..4063428 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  CLD04_RS21470 (CLD04_21470) soj 4063421..4064182 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  CLD04_RS21475 (CLD04_21475) yyaB 4064430..4064870 (+) 441 WP_015250779.1 PH domain-containing protein -
  CLD04_RS21480 (CLD04_21480) noc 4064921..4065772 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  CLD04_RS21485 (CLD04_21485) rsmG 4065894..4066613 (-) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=205844 CLD04_RS21465 WP_003226832.1 4062580..4063428(-) (spo0J) [Bacillus subtilis strain TLO3]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=205844 CLD04_RS21465 WP_003226832.1 4062580..4063428(-) (spo0J) [Bacillus subtilis strain TLO3]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGACCTCACGCAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTGAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387