Detailed information NTG0205805

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BO996_RS08570
• Genome accession: NZ_CP018101
• Coordinates: 1896947..1898167 (-)
• Length: 406 a.a.
• NCBI ID: WP_013803937.1
• Uniprot ID: A0A8I0ME26
• Organism: Delftia sp. HK171
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1891947..1903167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BO996_RS08545 (BO996_08475)	-	1892878..1893411 (+)	534	WP_013803942.1	MarR family winged helix-turn-helix transcriptional regulator	-
BO996_RS08550 (BO996_08480)	-	1893479..1894237 (+)	759	WP_016454137.1	class II aldolase/adducin family protein	-
BO996_RS08555 (BO996_08485)	-	1894256..1895281 (+)	1026	WP_071954502.1	2-dehydropantoate 2-reductase	-
BO996_RS08560 (BO996_08490)	cutA	1895334..1895732 (+)	399	WP_065346176.1	divalent-cation tolerance protein CutA	-
BO996_RS08565 (BO996_08495)	-	1895719..1896708 (-)	990	WP_071954503.1	tripartite tricarboxylate transporter substrate binding protein	-
BO996_RS08570 (BO996_08500)	pilA	1896947..1898167 (-)	1221	WP_013803937.1	signal recognition particle-docking protein FtsY	Machinery gene
BO996_RS08575 (BO996_08505)	-	1898196..1899674 (+)	1479	WP_013803936.1	pitrilysin family protein	-
BO996_RS08580 (BO996_08510)	-	1899701..1901062 (+)	1362	WP_013803935.1	pitrilysin family protein	-
BO996_RS08585 (BO996_08515)	rsmD	1901059..1901769 (+)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BO996_RS08590 (BO996_08520)	coaD	1901901..1902401 (+)	501	WP_013803934.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42456.38 Da
• Isoelectric Point: 5.7832

>NTDB_id=205805 BO996_RS08570 WP_013803937.1 1896947..1898167(-) (pilA) [Delftia sp. HK171]
MFSFFKKKPTPSAAEISPTDSSAAPEKAGIPATPPQDSPPALPPAAPAAPAADTGSAWWRKPFGGGKGDAAPPETPPAPA
AAPASTIAPADFIAAPEPTAKPEAEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=205805 BO996_RS08570 WP_013803937.1 1896947..1898167(-) (pilA) [Delftia sp. HK171]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGACGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCAGCCCTGCCACCGGCCGCGCCAGCGGCCCCGGCCGCCGACA
CCGGCAGTGCCTGGTGGCGCAAGCCCTTTGGCGGCGGCAAGGGCGATGCCGCGCCCCCCGAGACCCCGCCTGCCCCAGCT
GCTGCACCCGCGTCCACCATCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAAGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAACTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATAGGCGAGCACCAGCCCACCGTGATCATGGTGGCTGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCCGTCACCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCAGCCGTGAGCTTTGACGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCACCCCATGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTCGA
CGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGTGGCGTGCTGGCTGCCATTGCCC
AGGAACGGCCGATTCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAAACCTTCAACGCCCGGGAGTTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.052	100	0.51