Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BO996_RS07950 Genome accession   NZ_CP018101
Coordinates   1763658..1764056 (+) Length   132 a.a.
NCBI ID   WP_012203501.1    Uniprot ID   A0A210VYJ7
Organism   Delftia sp. HK171     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1758658..1769056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BO996_RS07920 (BO996_07855) - 1758774..1759295 (+) 522 WP_071954442.1 c-type cytochrome -
  BO996_RS07925 (BO996_07860) - 1759298..1759906 (+) 609 WP_071954443.1 DNA-3-methyladenine glycosylase I -
  BO996_RS07930 (BO996_07865) - 1760533..1760931 (+) 399 WP_043824200.1 hypothetical protein -
  BO996_RS07935 (BO996_07870) hemL 1761003..1762301 (-) 1299 WP_071954444.1 glutamate-1-semialdehyde 2,1-aminomutase -
  BO996_RS07940 (BO996_07875) - 1762386..1763342 (-) 957 WP_012203499.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  BO996_RS07945 - 1763458..1763610 (+) 153 WP_013804031.1 rubredoxin -
  BO996_RS07950 (BO996_07880) pilG 1763658..1764056 (+) 399 WP_012203501.1 response regulator Regulator
  BO996_RS07955 (BO996_07885) - 1764056..1764421 (+) 366 WP_013804030.1 response regulator -
  BO996_RS07960 (BO996_07890) - 1764437..1764964 (+) 528 WP_012203503.1 chemotaxis protein CheW -
  BO996_RS07965 (BO996_07895) - 1764983..1767232 (+) 2250 WP_071954445.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14616.85 Da        Isoelectric Point: 6.9242

>NTDB_id=205804 BO996_RS07950 WP_012203501.1 1763658..1764056(+) (pilG) [Delftia sp. HK171]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=205804 BO996_RS07950 WP_012203501.1 1763658..1764056(+) (pilG) [Delftia sp. HK171]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAACAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAAGTCAACGACTATCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTCTCC
GATACGCCCGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A210VYJ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment