Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BRL64_RS11495 Genome accession   NZ_CP018100
Coordinates   2221758..2222561 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain BRM1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2216758..2227561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS11475 (BRL64_11275) - 2218962..2219198 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  BRL64_RS11480 (BRL64_11280) - 2219235..2219972 (-) 738 WP_041117937.1 glycerophosphodiester phosphodiesterase -
  BRL64_RS11485 (BRL64_11285) - 2220201..2221301 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  BRL64_RS11495 (BRL64_11295) spo0A 2221758..2222561 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  BRL64_RS11500 (BRL64_11300) spoIVB 2222847..2224124 (-) 1278 WP_034280268.1 SpoIVB peptidase -
  BRL64_RS11505 (BRL64_11305) recN 2224323..2226056 (-) 1734 WP_081124564.1 DNA repair protein RecN Machinery gene
  BRL64_RS11510 (BRL64_11310) ahrC 2226090..2226539 (-) 450 WP_024422938.1 transcriptional regulator AhrC/ArgR -
  BRL64_RS11515 (BRL64_11315) - 2226703..2227557 (-) 855 WP_034280266.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=205767 BRL64_RS11495 WP_024422935.1 2221758..2222561(-) (spo0A) [Bacillus safensis strain BRM1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=205767 BRL64_RS11495 WP_024422935.1 2221758..2222561(-) (spo0A) [Bacillus safensis strain BRM1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAGGTCGCTTGGAGCAGAGGAAACATCGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment