Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BRL64_RS07160 Genome accession   NZ_CP018100
Coordinates   1379622..1380194 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain BRM1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1374622..1385194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS07130 (BRL64_07005) dapD 1374738..1375448 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BRL64_RS07135 (BRL64_07010) - 1375530..1376660 (+) 1131 WP_081124333.1 N-acetyldiaminopimelate deacetylase -
  BRL64_RS07140 (BRL64_07015) - 1376711..1376953 (+) 243 WP_024424725.1 YkuS family protein -
  BRL64_RS07145 (BRL64_07020) - 1376976..1377785 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  BRL64_RS07150 (BRL64_07025) ahpA 1378057..1378599 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  BRL64_RS07155 (BRL64_07030) - 1378682..1379140 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  BRL64_RS07160 (BRL64_07035) rok 1379622..1380194 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  BRL64_RS07165 (BRL64_07040) - 1380242..1381159 (-) 918 WP_081124334.1 sigmaE regulated sporulation protein -
  BRL64_RS07170 (BRL64_07045) - 1381245..1381826 (+) 582 WP_081124335.1 molybdenum cofactor guanylyltransferase -
  BRL64_RS07175 (BRL64_07050) - 1381856..1382872 (+) 1017 WP_081124336.1 ThiF family adenylyltransferase -
  BRL64_RS07180 (BRL64_07055) glp 1382882..1384159 (+) 1278 WP_196797906.1 gephyrin-like molybdotransferase Glp -
  BRL64_RS07185 (BRL64_07060) mobB 1384141..1384665 (+) 525 WP_081125261.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BRL64_RS07190 (BRL64_07065) - 1384662..1385153 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=205759 BRL64_RS07160 WP_024426871.1 1379622..1380194(+) (rok) [Bacillus safensis strain BRM1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=205759 BRL64_RS07160 WP_024426871.1 1379622..1380194(+) (rok) [Bacillus safensis strain BRM1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATACCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment