Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | CLD04_RS08770 | Genome accession | NZ_CP023257 |
| Coordinates | 1636644..1637669 (+) | Length | 341 a.a. |
| NCBI ID | WP_014476730.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain TLO3 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1631644..1642669
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLD04_RS08735 (CLD04_08735) | ylbE | 1631944..1632183 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| CLD04_RS08740 (CLD04_08740) | ylbF | 1632299..1632748 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| CLD04_RS08745 (CLD04_08745) | ylbG | 1632803..1633075 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| CLD04_RS08750 (CLD04_08750) | rsmD | 1633398..1633952 (+) | 555 | WP_017694816.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CLD04_RS08755 (CLD04_08755) | coaD | 1633957..1634442 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| CLD04_RS08760 (CLD04_08760) | spoVV | 1634453..1635679 (-) | 1227 | WP_017694817.1 | dipicolinic acid transporter SpoVV | - |
| CLD04_RS08765 (CLD04_08765) | ylbK | 1635860..1636642 (+) | 783 | WP_017694818.1 | patatin family protein | - |
| CLD04_RS08770 (CLD04_08770) | sepM | 1636644..1637669 (+) | 1026 | WP_014476730.1 | protease DdcP | Regulator |
| CLD04_RS08775 (CLD04_08775) | tmcAL | 1637686..1638933 (-) | 1248 | WP_003244707.1 | nucleotidyltransferase | - |
| CLD04_RS08780 (CLD04_08780) | - | 1638930..1639115 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| CLD04_RS08785 (CLD04_08785) | ylbN | 1639143..1639661 (+) | 519 | WP_014479718.1 | DUF177 domain-containing protein | - |
| CLD04_RS08790 (CLD04_08790) | rpmF | 1639683..1639862 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| CLD04_RS08795 (CLD04_08795) | gerR | 1640008..1640589 (+) | 582 | WP_015383592.1 | sporulation specific transcriptional regulator GerR | - |
| CLD04_RS08800 (CLD04_08800) | ylbP | 1640646..1641128 (-) | 483 | WP_014476736.1 | N-acetyltransferase | - |
| CLD04_RS08805 (CLD04_08805) | panEA | 1641288..1642184 (+) | 897 | WP_017694819.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37652.22 Da Isoelectric Point: 5.9932
>NTDB_id=205759 CLD04_RS08770 WP_014476730.1 1636644..1637669(+) (sepM) [Bacillus subtilis strain TLO3]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSDMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSDMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=205759 CLD04_RS08770 WP_014476730.1 1636644..1637669(+) (sepM) [Bacillus subtilis strain TLO3]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGTTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAGATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCAATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGTTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAGATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCAATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |