Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   BRL64_RS05505 Genome accession   NZ_CP018100
Coordinates   1062720..1063670 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus safensis strain BRM1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1057720..1068670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS05465 (BRL64_05365) - 1057946..1058404 (-) 459 WP_081124222.1 GNAT family N-acetyltransferase -
  BRL64_RS05470 (BRL64_05370) - 1058523..1059344 (+) 822 WP_024719675.1 MerR family transcriptional regulator -
  BRL64_RS05475 (BRL64_05375) - 1059577..1060041 (+) 465 WP_024719674.1 hypothetical protein -
  BRL64_RS05480 (BRL64_05380) - 1060213..1060548 (-) 336 WP_034282897.1 YolD-like family protein -
  BRL64_RS05485 (BRL64_05385) - 1060853..1061209 (+) 357 Protein_1011 competence protein ComK -
  BRL64_RS05490 (BRL64_05390) - 1061509..1061991 (+) 483 WP_081124223.1 hypothetical protein -
  BRL64_RS19425 - 1062023..1062181 (-) 159 WP_231293978.1 hypothetical protein -
  BRL64_RS05500 (BRL64_05395) - 1062284..1062559 (+) 276 WP_065214458.1 barstar family protein -
  BRL64_RS05505 (BRL64_05400) ceuB 1062720..1063670 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  BRL64_RS05510 (BRL64_05405) - 1063663..1064613 (+) 951 WP_081124225.1 iron chelate uptake ABC transporter family permease subunit -
  BRL64_RS05515 (BRL64_05410) - 1064604..1065362 (+) 759 WP_034282171.1 ABC transporter ATP-binding protein -
  BRL64_RS05520 (BRL64_05415) - 1065385..1066329 (+) 945 WP_081124226.1 siderophore ABC transporter substrate-binding protein -
  BRL64_RS05525 (BRL64_05420) - 1066468..1067421 (+) 954 WP_034282168.1 LCP family protein -
  BRL64_RS05530 (BRL64_05425) - 1067490..1067852 (-) 363 WP_034282166.1 hypothetical protein -
  BRL64_RS05535 (BRL64_05430) - 1068009..1068626 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=205747 BRL64_RS05505 WP_041117046.1 1062720..1063670(+) (ceuB) [Bacillus safensis strain BRM1]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=205747 BRL64_RS05505 WP_041117046.1 1062720..1063670(+) (ceuB) [Bacillus safensis strain BRM1]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCAGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATAGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment